Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | OW489_RS02160 | Genome accession | NZ_AP026446 |
| Coordinates | 456393..456803 (+) | Length | 136 a.a. |
| NCBI ID | WP_120856736.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain CHC155 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 451393..461803
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OW489_RS02125 (CHC155_04260) | - | 451566..452504 (-) | 939 | WP_120856727.1 | tetraacyldisaccharide 4'-kinase | - |
| OW489_RS02130 (CHC155_04270) | - | 452501..453283 (-) | 783 | WP_120856730.1 | NAD+ synthase | - |
| OW489_RS02140 (CHC155_04280) | ilvC | 453532..454524 (+) | 993 | WP_267286101.1 | ketol-acid reductoisomerase | - |
| OW489_RS02145 (CHC155_04290) | minD | 454548..455354 (+) | 807 | WP_001019097.1 | septum site-determining protein MinD | - |
| OW489_RS02150 (CHC155_04300) | minE | 455351..455584 (+) | 234 | WP_021304603.1 | cell division topological specificity factor MinE | - |
| OW489_RS02155 (CHC155_04310) | dprA | 455596..456396 (+) | 801 | WP_120856734.1 | DNA-processing protein DprA | Machinery gene |
| OW489_RS02160 (CHC155_04320) | dprB | 456393..456803 (+) | 411 | WP_120856736.1 | Holliday junction resolvase RuvX | Machinery gene |
| OW489_RS02165 (CHC155_04330) | - | 456857..457054 (+) | 198 | WP_240446566.1 | tetratricopeptide repeat protein | - |
| OW489_RS02170 (CHC155_04340) | - | 457245..457583 (+) | 339 | WP_000699916.1 | hypothetical protein | - |
| OW489_RS02175 (CHC155_04350) | - | 457567..458127 (+) | 561 | WP_267286102.1 | hypothetical protein | - |
| OW489_RS02180 (CHC155_04360) | - | 458138..458467 (+) | 330 | WP_120856740.1 | glycoside hydrolase family protein | - |
| OW489_RS02185 (CHC155_04370) | - | 458551..458817 (+) | 267 | WP_120856742.1 | lysozyme | - |
| OW489_RS02190 (CHC155_04380) | - | 459142..459528 (+) | 387 | WP_120856744.1 | DUF1294 domain-containing protein | - |
| OW489_RS02195 | - | 459528..460313 (+) | 786 | WP_120856746.1 | hypothetical protein | - |
| OW489_RS02200 (CHC155_04400) | - | 460303..461391 (+) | 1089 | WP_120856748.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 136 a.a. Molecular weight: 15537.20 Da Isoelectric Point: 9.1199
>NTDB_id=96309 OW489_RS02160 WP_120856736.1 456393..456803(+) (dprB) [Helicobacter pylori strain CHC155]
MILACDVGLKRIGIAMLLNGVILPLEAILRHNRNQASRDLSDLLREKNIQVLVVGKPNESYTDTNARIEYFIKLLDFKGE
IVFINEDRSSIEAYENLEHLGKKNKRLAIKDGRLDSLSACRILERYCQQVLKKLAI
MILACDVGLKRIGIAMLLNGVILPLEAILRHNRNQASRDLSDLLREKNIQVLVVGKPNESYTDTNARIEYFIKLLDFKGE
IVFINEDRSSIEAYENLEHLGKKNKRLAIKDGRLDSLSACRILERYCQQVLKKLAI
Nucleotide
Download Length: 411 bp
>NTDB_id=96309 OW489_RS02160 WP_120856736.1 456393..456803(+) (dprB) [Helicobacter pylori strain CHC155]
GTGATTTTGGCATGCGATGTGGGGCTGAAGCGCATTGGGATCGCTATGCTTTTAAACGGCGTTATCTTGCCTTTAGAAGC
GATTTTGCGCCACAACAGGAATCAGGCCTCTAGGGATTTGAGCGATTTATTGAGGGAAAAAAACATTCAGGTGCTGGTGG
TGGGCAAGCCCAACGAAAGCTATACGGACACGAACGCGCGCATTGAATATTTCATCAAGCTTTTGGATTTTAAGGGTGAA
ATCGTTTTTATTAATGAAGACAGATCCAGCATAGAAGCCTATGAAAATTTAGAGCATTTGGGTAAGAAAAACAAGCGGCT
CGCTATTAAAGACGGCCGGCTAGACTCTTTGAGCGCTTGTAGGATCTTGGAGCGCTATTGCCAGCAGGTTTTGAAAAAGC
TTGCGATTTGA
GTGATTTTGGCATGCGATGTGGGGCTGAAGCGCATTGGGATCGCTATGCTTTTAAACGGCGTTATCTTGCCTTTAGAAGC
GATTTTGCGCCACAACAGGAATCAGGCCTCTAGGGATTTGAGCGATTTATTGAGGGAAAAAAACATTCAGGTGCTGGTGG
TGGGCAAGCCCAACGAAAGCTATACGGACACGAACGCGCGCATTGAATATTTCATCAAGCTTTTGGATTTTAAGGGTGAA
ATCGTTTTTATTAATGAAGACAGATCCAGCATAGAAGCCTATGAAAATTTAGAGCATTTGGGTAAGAAAAACAAGCGGCT
CGCTATTAAAGACGGCCGGCTAGACTCTTTGAGCGCTTGTAGGATCTTGGAGCGCTATTGCCAGCAGGTTTTGAAAAAGC
TTGCGATTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
95.455 |
97.059 |
0.926 |