Detailed information NTG0963081

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: WMC18_RS18010
• Genome accession: NZ_CP150130
• Coordinates: 3549865..3551028 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain SEC-482
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3544865..3556028

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WMC18_RS17980 (WMC18_17940)	-	3545130..3545549 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
WMC18_RS17985 (WMC18_17945)	comFC	3545623..3546312 (-)	690	WP_196769287.1	phosphoribosyltransferase family protein	Machinery gene
WMC18_RS17990 (WMC18_17950)	-	3546318..3546602 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
WMC18_RS17995 (WMC18_17955)	comFA	3546660..3548045 (-)	1386	WP_043867470.1	DEAD/DEAH box helicase	Machinery gene
WMC18_RS18000 (WMC18_17960)	-	3548153..3549001 (-)	849	WP_003151387.1	DegV family protein	-
WMC18_RS18005 (WMC18_17965)	degU	3549099..3549788 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
WMC18_RS18010 (WMC18_17970)	degS	3549865..3551028 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
WMC18_RS18015 (WMC18_17975)	-	3551251..3551898 (+)	648	WP_003151384.1	YigZ family protein	-
WMC18_RS18020 (WMC18_17980)	-	3551903..3553117 (+)	1215	WP_107994213.1	LCP family protein	-
WMC18_RS18025 (WMC18_17985)	-	3553207..3554283 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
WMC18_RS18030 (WMC18_17990)	tuaH	3554416..3555612 (-)	1197	WP_003151381.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=963081 WMC18_RS18010 WP_003151385.1 3549865..3551028(-) (degS) [Bacillus velezensis strain SEC-482]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=963081 WMC18_RS18010 WP_003151385.1 3549865..3551028(-) (degS) [Bacillus velezensis strain SEC-482]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGACGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAGTCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948