Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | UXQ80_RS10925 | Genome accession | NZ_CP149974 |
| Coordinates | 2165903..2166373 (-) | Length | 156 a.a. |
| NCBI ID | WP_000934759.1 | Uniprot ID | A0A2I7Y8V1 |
| Organism | Staphylococcus aureus strain BSN125 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2135584..2187713 | 2165903..2166373 | within | 0 |
Gene organization within MGE regions
Location: 2135584..2187713
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| UXQ80_RS10710 (UXQ80_10710) | scn | 2135584..2135934 (-) | 351 | WP_000702262.1 | complement inhibitor SCIN-A | - |
| UXQ80_RS10715 (UXQ80_10715) | - | 2136617..2137067 (+) | 451 | Protein_2068 | chemotaxis-inhibiting protein CHIPS | - |
| UXQ80_RS10720 (UXQ80_10720) | - | 2137162..2137499 (-) | 338 | Protein_2069 | SH3 domain-containing protein | - |
| UXQ80_RS10725 (UXQ80_10725) | sak | 2138143..2138634 (-) | 492 | WP_000920042.1 | staphylokinase | - |
| UXQ80_RS10730 (UXQ80_10730) | - | 2138825..2139580 (-) | 756 | WP_000861026.1 | CHAP domain-containing protein | - |
| UXQ80_RS10735 (UXQ80_10735) | - | 2139592..2139846 (-) | 255 | WP_000611512.1 | phage holin | - |
| UXQ80_RS10740 (UXQ80_10740) | - | 2139898..2140005 (+) | 108 | WP_031762631.1 | hypothetical protein | - |
| UXQ80_RS10745 (UXQ80_10745) | pepG1 | 2140058..2140192 (-) | 135 | WP_000226108.1 | type I toxin-antitoxin system toxin PepG1 | - |
| UXQ80_RS10750 (UXQ80_10750) | sep | 2140437..2141219 (-) | 783 | WP_000034846.1 | staphylococcal enterotoxin type P | - |
| UXQ80_RS10755 (UXQ80_10755) | - | 2141631..2142005 (-) | 375 | WP_000340977.1 | hypothetical protein | - |
| UXQ80_RS10760 (UXQ80_10760) | - | 2142061..2142348 (-) | 288 | WP_001262621.1 | hypothetical protein | - |
| UXQ80_RS10765 (UXQ80_10765) | - | 2142394..2142546 (-) | 153 | WP_001000058.1 | hypothetical protein | - |
| UXQ80_RS10770 (UXQ80_10770) | - | 2142539..2146321 (-) | 3783 | WP_320237156.1 | phage tail spike protein | - |
| UXQ80_RS10775 (UXQ80_10775) | - | 2146337..2147821 (-) | 1485 | WP_000567396.1 | phage tail domain-containing protein | - |
| UXQ80_RS10780 (UXQ80_10780) | - | 2147818..2152347 (-) | 4530 | WP_000504568.1 | phage tail tape measure protein | - |
| UXQ80_RS10785 (UXQ80_10785) | gpGT | 2152404..2152541 (-) | 138 | WP_001549167.1 | phage tail assembly chaperone GT | - |
| UXQ80_RS10790 (UXQ80_10790) | gpG | 2152592..2152942 (-) | 351 | WP_001096355.1 | phage tail assembly chaperone G | - |
| UXQ80_RS10795 (UXQ80_10795) | - | 2152992..2153222 (-) | 231 | Protein_2084 | Ig-like domain-containing protein | - |
| UXQ80_RS10800 (UXQ80_10800) | - | 2153258..2153902 (-) | 645 | WP_000268740.1 | major tail protein | - |
| UXQ80_RS10805 (UXQ80_10805) | - | 2153903..2154310 (-) | 408 | WP_000565498.1 | hypothetical protein | - |
| UXQ80_RS10810 (UXQ80_10810) | - | 2154307..2154711 (-) | 405 | WP_000114226.1 | HK97 gp10 family phage protein | - |
| UXQ80_RS10815 (UXQ80_10815) | - | 2154708..2155070 (-) | 363 | WP_000755150.1 | head-tail adaptor protein | - |
| UXQ80_RS10820 (UXQ80_10820) | - | 2155054..2155338 (-) | 285 | WP_000150936.1 | phage head-tail adapter protein | - |
| UXQ80_RS10825 (UXQ80_10825) | - | 2155328..2155612 (-) | 285 | WP_000238236.1 | hypothetical protein | - |
| UXQ80_RS10830 (UXQ80_10830) | - | 2155632..2156777 (-) | 1146 | WP_000154559.1 | phage major capsid protein | - |
| UXQ80_RS10835 (UXQ80_10835) | - | 2156801..2157538 (-) | 738 | WP_000642728.1 | head maturation protease, ClpP-related | - |
| UXQ80_RS10840 (UXQ80_10840) | - | 2157522..2158709 (-) | 1188 | WP_000025274.1 | phage portal protein | - |
| UXQ80_RS10845 (UXQ80_10845) | - | 2158725..2160386 (-) | 1662 | WP_000625088.1 | terminase large subunit | - |
| UXQ80_RS10850 (UXQ80_10850) | - | 2160383..2160727 (-) | 345 | WP_000402904.1 | hypothetical protein | - |
| UXQ80_RS10855 (UXQ80_10855) | - | 2160857..2161156 (-) | 300 | WP_000988332.1 | HNH endonuclease | - |
| UXQ80_RS10860 (UXQ80_10860) | - | 2161388..2161804 (-) | 417 | WP_000590122.1 | hypothetical protein | - |
| UXQ80_RS10865 (UXQ80_10865) | - | 2161832..2162032 (-) | 201 | WP_001557462.1 | DUF1514 family protein | - |
| UXQ80_RS10870 (UXQ80_10870) | rinB | 2162032..2162181 (-) | 150 | WP_000595265.1 | transcriptional activator RinB | - |
| UXQ80_RS10875 (UXQ80_10875) | - | 2162178..2162384 (-) | 207 | WP_000195784.1 | DUF1381 domain-containing protein | - |
| UXQ80_RS10880 (UXQ80_10880) | - | 2162381..2162626 (-) | 246 | WP_001282077.1 | hypothetical protein | - |
| UXQ80_RS10885 (UXQ80_10885) | - | 2162663..2163199 (-) | 537 | WP_000185693.1 | dUTPase | - |
| UXQ80_RS10890 (UXQ80_10890) | - | 2163196..2163441 (-) | 246 | WP_001065108.1 | DUF1024 family protein | - |
| UXQ80_RS10895 (UXQ80_10895) | - | 2163456..2163698 (-) | 243 | WP_000221877.1 | SAV1978 family virulence-associated passenger protein | - |
| UXQ80_RS10900 (UXQ80_10900) | - | 2163701..2163958 (-) | 258 | WP_000111491.1 | DUF3310 domain-containing protein | - |
| UXQ80_RS10905 (UXQ80_10905) | - | 2163958..2164329 (-) | 372 | WP_000101279.1 | SA1788 family PVL leukocidin-associated protein | - |
| UXQ80_RS10910 (UXQ80_10910) | - | 2164342..2164746 (-) | 405 | WP_000401969.1 | RusA family crossover junction endodeoxyribonuclease | - |
| UXQ80_RS10915 (UXQ80_10915) | - | 2164755..2164973 (-) | 219 | WP_000338528.1 | hypothetical protein | - |
| UXQ80_RS10920 (UXQ80_10920) | - | 2164980..2165873 (-) | 894 | WP_000148333.1 | DnaD domain-containing protein | - |
| UXQ80_RS10925 (UXQ80_10925) | ssbA | 2165903..2166373 (-) | 471 | WP_000934759.1 | single-stranded DNA-binding protein | Machinery gene |
| UXQ80_RS10930 (UXQ80_10930) | - | 2166374..2166991 (-) | 618 | WP_064135358.1 | MBL fold metallo-hydrolase | - |
| UXQ80_RS10935 (UXQ80_10935) | - | 2167072..2167992 (-) | 921 | WP_000180600.1 | recombinase RecT | - |
| UXQ80_RS10940 (UXQ80_10940) | - | 2167994..2169937 (-) | 1944 | WP_000700555.1 | AAA family ATPase | - |
| UXQ80_RS10945 (UXQ80_10945) | - | 2169946..2170209 (-) | 264 | WP_001205732.1 | hypothetical protein | - |
| UXQ80_RS10950 (UXQ80_10950) | - | 2170218..2170478 (-) | 261 | WP_000291510.1 | DUF1108 family protein | - |
| UXQ80_RS10955 (UXQ80_10955) | - | 2170483..2170785 (-) | 303 | WP_000165371.1 | DUF2482 family protein | - |
| UXQ80_RS10960 (UXQ80_10960) | - | 2170880..2171041 (-) | 162 | WP_000048129.1 | DUF1270 family protein | - |
| UXQ80_RS10965 (UXQ80_10965) | - | 2171038..2171361 (-) | 324 | WP_001120201.1 | DUF771 domain-containing protein | - |
| UXQ80_RS10970 (UXQ80_10970) | - | 2171416..2171796 (+) | 381 | WP_000762521.1 | DUF2513 domain-containing protein | - |
| UXQ80_RS10975 (UXQ80_10975) | - | 2171783..2171980 (-) | 198 | WP_001148856.1 | hypothetical protein | - |
| UXQ80_RS10980 (UXQ80_10980) | - | 2171996..2172748 (-) | 753 | WP_001148605.1 | phage antirepressor KilAC domain-containing protein | - |
| UXQ80_RS10985 (UXQ80_10985) | - | 2172799..2173128 (+) | 330 | WP_000128909.1 | hypothetical protein | - |
| UXQ80_RS10990 (UXQ80_10990) | - | 2173117..2173332 (-) | 216 | WP_001025404.1 | MW1434 family type I TA system toxin | - |
| UXQ80_RS10995 (UXQ80_10995) | - | 2173348..2173611 (-) | 264 | WP_000854072.1 | helix-turn-helix transcriptional regulator | - |
| UXQ80_RS11000 (UXQ80_11000) | - | 2173608..2173782 (-) | 175 | Protein_2125 | transcriptional regulator | - |
| UXQ80_RS11005 (UXQ80_11005) | - | 2173745..2174458 (+) | 714 | WP_001031454.1 | XRE family transcriptional regulator | - |
| UXQ80_RS11010 (UXQ80_11010) | - | 2174474..2175406 (+) | 933 | WP_000759682.1 | exonuclease domain-containing protein | - |
| UXQ80_RS11015 (UXQ80_11015) | - | 2175412..2175753 (+) | 342 | WP_000591749.1 | hypothetical protein | - |
| UXQ80_RS11020 (UXQ80_11020) | - | 2175957..2176139 (+) | 183 | WP_000694772.1 | hypothetical protein | - |
| UXQ80_RS11025 (UXQ80_11025) | - | 2176239..2177222 (+) | 984 | WP_001558608.1 | glycosyltransferase family 2 protein | - |
| UXQ80_RS11030 (UXQ80_11030) | - | 2177233..2177475 (+) | 243 | WP_000427213.1 | hypothetical protein | - |
| UXQ80_RS11035 (UXQ80_11035) | - | 2177538..2178575 (+) | 1038 | WP_000857180.1 | site-specific integrase | - |
| UXQ80_RS11040 (UXQ80_11040) | sph | 2178632..2179456 (+) | 825 | Protein_2133 | sphingomyelin phosphodiesterase | - |
| UXQ80_RS11045 (UXQ80_11045) | lukG | 2179694..2180710 (-) | 1017 | WP_000595392.1 | bi-component leukocidin LukGH subunit G | - |
| UXQ80_RS11050 (UXQ80_11050) | lukH | 2180732..2181787 (-) | 1056 | WP_000791411.1 | bi-component leukocidin LukGH subunit H | - |
| UXQ80_RS11055 (UXQ80_11055) | - | 2182223..2183446 (+) | 1224 | WP_000206625.1 | ArgE/DapE family deacylase | - |
| UXQ80_RS11060 (UXQ80_11060) | - | 2183890..2185197 (+) | 1308 | WP_001045079.1 | TrkH family potassium uptake protein | - |
| UXQ80_RS11065 (UXQ80_11065) | groL | 2185737..2187353 (-) | 1617 | WP_000240642.1 | chaperonin GroEL | - |
| UXQ80_RS11070 (UXQ80_11070) | groES | 2187429..2187713 (-) | 285 | WP_000917289.1 | co-chaperone GroES | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17641.52 Da Isoelectric Point: 5.2672
>NTDB_id=962467 UXQ80_RS10925 WP_000934759.1 2165903..2166373(-) (ssbA) [Staphylococcus aureus strain BSN125]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=962467 UXQ80_RS10925 WP_000934759.1 2165903..2166373(-) (ssbA) [Staphylococcus aureus strain BSN125]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.932 |
100 |
0.635 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50.588 |
100 |
0.551 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.203 |
100 |
0.365 |