Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | WGQ49_RS05280 | Genome accession | NZ_CP149886 |
| Coordinates | 1012051..1012353 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni strain NPRC(S) 01.13897 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1007051..1017353
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| WGQ49_RS05255 (WGQ49_05255) | rpsR | 1007414..1007674 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| WGQ49_RS05260 (WGQ49_05260) | lon | 1007734..1010109 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| WGQ49_RS05265 (WGQ49_05265) | - | 1010126..1010773 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| WGQ49_RS05270 (WGQ49_05270) | fliW | 1010934..1011323 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| WGQ49_RS05275 (WGQ49_05275) | proC | 1011323..1012054 (+) | 732 | WP_002864259.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| WGQ49_RS05280 (WGQ49_05280) | ctsT | 1012051..1012353 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| WGQ49_RS05285 (WGQ49_05285) | - | 1012350..1013012 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| WGQ49_RS05290 (WGQ49_05290) | - | 1013009..1013461 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| WGQ49_RS05295 (WGQ49_05295) | hemD | 1013458..1014087 (-) | 630 | WP_002878794.1 | uroporphyrinogen-III synthase | - |
| WGQ49_RS05300 (WGQ49_05300) | thiE | 1014065..1014697 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| WGQ49_RS05305 (WGQ49_05305) | thiD | 1014687..1015499 (-) | 813 | WP_002890078.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| WGQ49_RS05310 (WGQ49_05310) | - | 1015496..1016182 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| WGQ49_RS05315 (WGQ49_05315) | - | 1016179..1016940 (-) | 762 | WP_002852748.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=962075 WGQ49_RS05280 WP_002853046.1 1012051..1012353(+) (ctsT) [Campylobacter jejuni strain NPRC(S) 01.13897]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=962075 WGQ49_RS05280 WP_002853046.1 1012051..1012353(+) (ctsT) [Campylobacter jejuni strain NPRC(S) 01.13897]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |