Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   ACJED3_RS18585 Genome accession   NZ_CP174155
Coordinates   3488666..3489376 (+) Length   236 a.a.
NCBI ID   WP_014480585.1    Uniprot ID   -
Organism   Bacillus subtilis strain G01     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 3483666..3494376
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJED3_RS18565 ytfP 3484146..3485408 (-) 1263 WP_072557170.1 NAD(P)/FAD-dependent oxidoreductase -
  ACJED3_RS18570 murJ 3485611..3487245 (+) 1635 WP_014480588.1 lipid II flippase MurJ -
  ACJED3_RS18575 rsuA 3487314..3488033 (+) 720 WP_014480587.1 pseudouridine synthase -
  ACJED3_RS18580 ytzE 3488155..3488376 (-) 222 WP_003152337.1 DeoR family transcriptional regulator -
  ACJED3_RS18585 pptA 3488666..3489376 (+) 711 WP_014480585.1 ABC transporter ATP-binding protein Regulator
  ACJED3_RS18590 ythQ 3489373..3490530 (+) 1158 WP_014480584.1 ABC transporter permease -
  ACJED3_RS18595 pbuO 3490569..3491867 (-) 1299 WP_014480583.1 hypoxanthine/guanine permease PbuO -
  ACJED3_RS18600 pepV 3491964..3493355 (+) 1392 WP_014480582.1 dipeptidase PepV -
  ACJED3_RS18605 cysK 3493389..3494324 (-) 936 WP_003229237.1 cysteine synthase A -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 26545.69 Da        Isoelectric Point: 5.8478

>NTDB_id=962015 ACJED3_RS18585 WP_014480585.1 3488666..3489376(+) (pptA) [Bacillus subtilis strain G01]
MTNLLEASIEQAGYTSRKKVLTDVFLEVRKGELVGLIGANGAGKSTAIKAILGLSEDFKGHIAWNDCSFAYIPEHPSFYE
ELTLWEHLDLISTLHGIEGREFVHRAQSLLQTFSLDHVKHELPVTFSKGMQQKLMLIQAFLSKPDMYVIDEPFIGLDPIS
TKRFVDMLKAEKERGAGILMCTHVLDTAEKICDRFYMIEKGSLFLQGTLKDIQDKTGLEGQSLLDCFYKAVQGDRL

Nucleotide


Download         Length: 711 bp        

>NTDB_id=962015 ACJED3_RS18585 WP_014480585.1 3488666..3489376(+) (pptA) [Bacillus subtilis strain G01]
TTGACAAATTTGCTTGAAGCTTCAATAGAACAGGCCGGGTATACAAGCCGAAAAAAAGTGCTCACCGATGTTTTTCTGGA
AGTCAGAAAAGGGGAACTAGTTGGACTGATCGGAGCTAACGGCGCCGGAAAAAGCACCGCAATCAAGGCGATACTCGGCC
TTTCAGAAGATTTTAAAGGGCATATTGCCTGGAACGACTGTTCATTTGCATATATTCCGGAGCATCCGTCCTTTTACGAA
GAACTGACGCTGTGGGAGCATTTGGATCTGATCAGCACACTCCACGGCATTGAAGGGAGAGAATTTGTGCATCGGGCCCA
AAGCCTGCTGCAGACGTTTTCGCTTGATCATGTCAAACATGAGCTGCCTGTCACCTTTTCGAAGGGCATGCAGCAAAAAC
TAATGCTTATCCAGGCCTTTCTCTCTAAGCCGGATATGTATGTGATTGATGAACCGTTTATCGGCCTTGATCCGATATCG
ACGAAACGCTTTGTGGACATGCTTAAGGCTGAAAAAGAACGTGGAGCCGGAATTCTTATGTGCACGCATGTACTCGATAC
CGCGGAAAAAATCTGTGACCGGTTTTATATGATTGAGAAAGGTTCATTATTTCTCCAAGGCACGTTAAAAGATATTCAGG
ACAAGACCGGATTAGAGGGGCAGTCATTGCTTGACTGTTTTTATAAGGCAGTTCAAGGTGATCGGCTATGA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(21-153)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

44.017

99.153

0.436
  pptA Streptococcus thermophilus LMD-9

43.59

99.153

0.432