Detailed information    

insolico Bioinformatically predicted

Overview

Name   comQ   Type   Regulator
Locus tag   ACJED3_RS17585 Genome accession   NZ_CP174155
Coordinates   3304322..3305185 (+) Length   287 a.a.
NCBI ID   WP_014480705.1    Uniprot ID   Q9FAF1
Organism   Bacillus subtilis strain G01     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 3299322..3310185
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACJED3_RS17555 pncA 3299788..3300339 (+) 552 WP_014480709.1 cysteine hydrolase family protein -
  ACJED3_RS17560 pncB 3300355..3301827 (+) 1473 WP_014480708.1 nicotinate phosphoribosyltransferase -
  ACJED3_RS17565 pdeH 3301963..3303192 (+) 1230 WP_014480707.1 cyclic di-GMP phosphodiesterase -
  ACJED3_RS17570 - 3303168..3303536 (-) 369 WP_014477834.1 hypothetical protein -
  ACJED3_RS17575 - 3303650..3303775 (-) 126 WP_003228793.1 hypothetical protein -
  ACJED3_RS17580 degQ 3303997..3304137 (+) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  ACJED3_RS17585 comQ 3304322..3305185 (+) 864 WP_014480705.1 polyprenyl synthetase family protein Regulator
  ACJED3_RS17590 comX 3305187..3305408 (+) 222 WP_014480704.1 competence pheromone ComX -
  ACJED3_RS17595 comP 3305424..3307736 (+) 2313 WP_014480703.1 sensor histidine kinase Regulator
  ACJED3_RS17600 comA 3307817..3308461 (+) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  ACJED3_RS17605 yuxO 3308480..3308860 (+) 381 WP_017695528.1 hotdog fold thioesterase -
  ACJED3_RS17610 mnhG 3308899..3309273 (-) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  ACJED3_RS17615 mrpF 3309257..3309541 (-) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  ACJED3_RS17620 mrpE 3309541..3310017 (-) 477 WP_003228815.1 Na+/H+ antiporter subunit E -

Sequence

Protein


Download         Length: 287 a.a.        Molecular weight: 32882.57 Da        Isoelectric Point: 5.2201

>NTDB_id=962011 ACJED3_RS17585 WP_014480705.1 3304322..3305185(+) (comQ) [Bacillus subtilis strain G01]
MKEIVDENILNEDLKVKLISFIKEKKQFSFAELAYYHYIAFDGKNDKAIELLASGIELLILSADIFDDIEDKDNLQASWM
KLDPSIATNAATALYTLSLQVIGSVSNHPKLLSLTLQYSLQSLQGQHVDLNLTASSESEYIEMIKLKSGSLVTLPSILGV
YLATGEYNETVEEYSRYLGIVEQIANDHYGLYYPNYNDFKTRHTLAFNYLKNKFNQSSIDLLNFYAQENHMINNLEDLKG
KLRESGVIQYLNVIKNLAVENFKESFKKLRLDEQRKNKLLIQLLRGI

Nucleotide


Download         Length: 864 bp        

>NTDB_id=962011 ACJED3_RS17585 WP_014480705.1 3304322..3305185(+) (comQ) [Bacillus subtilis strain G01]
ATGAAGGAGATTGTGGATGAAAATATTTTAAATGAGGACTTAAAAGTGAAGCTCATTTCTTTTATCAAAGAAAAAAAACA
ATTTTCATTTGCAGAACTGGCTTATTACCATTACATAGCATTTGATGGAAAAAACGACAAAGCAATTGAGTTATTGGCGT
CAGGTATAGAACTTTTAATTTTATCTGCGGACATTTTTGACGATATTGAGGATAAGGACAATCTTCAGGCTTCTTGGATG
AAATTAGATCCTTCTATAGCAACTAACGCAGCTACCGCACTTTATACATTAAGTCTGCAAGTAATAGGTTCAGTCTCAAA
TCATCCAAAACTTTTAAGCCTTACTTTGCAATATTCACTCCAATCTTTACAAGGACAACATGTAGATTTGAATTTAACAG
CCTCATCAGAATCAGAGTATATTGAAATGATTAAACTTAAGTCGGGTTCTCTGGTAACATTGCCCAGTATTCTTGGTGTA
TATCTGGCAACTGGAGAATATAATGAAACAGTTGAGGAGTATTCACGTTATTTAGGTATAGTCGAGCAAATTGCAAATGA
TCACTATGGACTTTATTACCCTAACTATAATGACTTCAAAACTAGACATACGCTTGCCTTCAATTATCTTAAAAATAAAT
TTAACCAATCATCAATTGACTTATTAAATTTTTATGCGCAAGAAAATCATATGATAAATAATTTGGAAGATTTGAAGGGA
AAGTTAAGAGAATCAGGTGTAATACAATATTTGAATGTTATAAAAAATTTAGCAGTGGAAAATTTTAAGGAATCATTCAA
AAAACTGAGATTAGATGAACAAAGAAAAAATAAATTACTTATTCAATTATTAAGGGGGATTTAA

Domains

Predicted by InterProScan.

Polyprenyl synthetase (polyprenyl_synt)

(45-195)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q9FAF1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

45

97.561

0.439