Detailed information NTG0961705

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: WKW49_RS01135
• Genome accession: NZ_CP149819
• Coordinates: 275937..276941 (+)
• Length: 334 a.a.
• NCBI ID: WP_339074847.1
• Uniprot ID: -
• Organism: Teredinibacter turnerae strain SR02026
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 270937..281941

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WKW49_RS01115 (WKW49_01115)	-	271424..271639 (+)	216	WP_015818151.1	hypothetical protein	-
WKW49_RS01120 (WKW49_01120)	-	271720..274605 (-)	2886	WP_339066952.1	class I adenylate cyclase	-
WKW49_RS01125 (WKW49_01125)	coaD	274702..275190 (-)	489	WP_015819787.1	pantetheine-phosphate adenylyltransferase	-
WKW49_RS01130 (WKW49_01130)	rsmD	275302..275876 (-)	575	Protein_225	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
WKW49_RS01135 (WKW49_01135)	pilA	275937..276941 (+)	1005	WP_339074847.1	signal recognition particle-docking protein FtsY	Machinery gene
WKW49_RS01140 (WKW49_01140)	ftsE	276964..277641 (+)	678	WP_015817317.1	cell division ATP-binding protein FtsE	-
WKW49_RS01145 (WKW49_01145)	ftsX	277643..278617 (+)	975	WP_018013444.1	permease-like cell division protein FtsX	-
WKW49_RS01150 (WKW49_01150)	rpoH	278785..279639 (+)	855	WP_015820626.1	RNA polymerase sigma factor RpoH	-
WKW49_RS01155 (WKW49_01155)	-	279656..280090 (+)	435	WP_339068751.1	DUF423 domain-containing protein	-
WKW49_RS01160 (WKW49_01160)	trmB	280124..280813 (+)	690	WP_339066957.1	tRNA (guanosine(46)-N7)-methyltransferase TrmB	-
WKW49_RS01165 (WKW49_01165)	-	281237..281803 (+)	567	WP_015818644.1	TIGR02444 family protein	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 35519.61 Da
• Isoelectric Point: 5.1078

>NTDB_id=961705 WKW49_RS01135 WP_339074847.1 275937..276941(+) (pilA) [Teredinibacter turnerae strain SR02026]
MFFKSKKSKSEGPESEAVAQPAEKPTEKVSFFTRIKQGLSRTSNQLSGGLASLLLGKKAIDDELLEEIETLLLMADVGVE
ATTDIIDDLTARVARKQLADSDALYAALRQSLADLLLDVEAPLDVECAQKPFVILVVGVNGVGKTTTIGKLAKRFQNQGK
SVMLAAGDTFRAAAVEQLQVWGERNKVPVVAQHTGADSASVIYDAVQSAQARQIDVVIADTAGRLHNKSNLMEELAKVKR
VMAKLDDSAPHEVLLVLDAGTGQNALSQAGHFKEAAGVTGLALTKLDGTAKGGIIFALSKQYGLPVRYIGVGEGIDDLQP
FQATSFIDALFGTE

Nucleotide

• Length: 1005 bp

>NTDB_id=961705 WKW49_RS01135 WP_339074847.1 275937..276941(+) (pilA) [Teredinibacter turnerae strain SR02026]
ATGTTTTTTAAGAGCAAAAAAAGCAAATCCGAAGGCCCCGAGAGCGAAGCTGTGGCCCAGCCAGCGGAGAAGCCCACAGA
AAAGGTCAGCTTCTTTACCCGCATCAAACAGGGCTTATCCCGCACCAGTAACCAGCTGTCTGGCGGGCTGGCGAGTTTGC
TGCTGGGCAAAAAGGCTATTGACGACGAGCTGCTTGAAGAAATCGAAACTCTGTTGTTGATGGCCGATGTAGGGGTTGAA
GCCACCACCGATATTATTGACGATCTCACCGCGCGAGTTGCACGCAAGCAGTTGGCCGATTCGGATGCGCTCTACGCGGC
GTTGCGCCAGTCCCTCGCCGACTTGTTGCTGGATGTTGAAGCGCCACTGGATGTGGAGTGCGCACAAAAGCCATTCGTTA
TTCTTGTGGTCGGCGTCAATGGGGTGGGCAAAACCACCACCATCGGCAAACTCGCCAAACGTTTTCAAAACCAAGGCAAA
TCCGTGATGTTAGCCGCCGGCGATACTTTCCGCGCTGCAGCGGTGGAGCAACTGCAGGTGTGGGGCGAGCGCAATAAGGT
GCCCGTGGTGGCTCAGCACACGGGCGCGGATAGCGCATCTGTTATTTACGATGCTGTACAGTCAGCGCAGGCGCGGCAAA
TCGATGTGGTGATCGCAGACACCGCCGGTCGCTTGCACAACAAGAGCAATCTGATGGAGGAACTGGCCAAGGTCAAACGG
GTCATGGCCAAGCTGGATGACAGCGCACCGCATGAAGTGCTTTTGGTGTTAGACGCGGGTACCGGCCAGAATGCGCTGTC
ACAGGCGGGGCATTTCAAAGAGGCTGCAGGTGTGACCGGGCTGGCGCTGACCAAGCTGGATGGCACAGCGAAAGGCGGTA
TTATCTTTGCTCTCAGCAAACAGTATGGCCTGCCGGTGCGCTATATCGGTGTCGGCGAAGGCATAGACGATTTGCAGCCA
TTCCAGGCCACTAGCTTTATCGATGCACTGTTCGGGACAGAATAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (131-331)

• SRP54-type protein, helical bundle domain (SRP54_N) (46-112)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	54.375	95.808	0.521