Detailed information NTG0961682

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: WKI14_RS01115
• Genome accession: NZ_CP149818
• Coordinates: 266218..267222 (+)
• Length: 334 a.a.
• NCBI ID: WP_015820929.1
• Uniprot ID: C6AQY9
• Organism: Teredinibacter turnerae strain SR01903
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 261218..272222

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WKI14_RS01095 (WKI14_01095)	-	261705..261920 (+)	216	WP_015818151.1	hypothetical protein	-
WKI14_RS01100 (WKI14_01100)	-	262001..264886 (-)	2886	WP_339066952.1	class I adenylate cyclase	-
WKI14_RS01105 (WKI14_01105)	coaD	264983..265471 (-)	489	WP_015819787.1	pantetheine-phosphate adenylyltransferase	-
WKI14_RS01110 (WKI14_01110)	rsmD	265583..266157 (-)	575	Protein_221	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
WKI14_RS01115 (WKI14_01115)	pilA	266218..267222 (+)	1005	WP_015820929.1	signal recognition particle-docking protein FtsY	Machinery gene
WKI14_RS01120 (WKI14_01120)	ftsE	267245..267922 (+)	678	WP_015817317.1	cell division ATP-binding protein FtsE	-
WKI14_RS01125 (WKI14_01125)	ftsX	267924..268898 (+)	975	WP_018013444.1	permease-like cell division protein FtsX	-
WKI14_RS01130 (WKI14_01130)	rpoH	269066..269920 (+)	855	WP_015820626.1	RNA polymerase sigma factor RpoH	-
WKI14_RS01135 (WKI14_01135)	-	269937..270371 (+)	435	WP_339068751.1	DUF423 domain-containing protein	-
WKI14_RS01140 (WKI14_01140)	trmB	270405..271094 (+)	690	WP_339066957.1	tRNA (guanosine(46)-N7)-methyltransferase TrmB	-
WKI14_RS01145 (WKI14_01145)	-	271518..272084 (+)	567	WP_028875757.1	TIGR02444 family protein	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 35549.64 Da
• Isoelectric Point: 5.1078

>NTDB_id=961682 WKI14_RS01115 WP_015820929.1 266218..267222(+) (pilA) [Teredinibacter turnerae strain SR01903]
MFFKSKKSKSESPESEAVAQPAEKPTEKVSFFTRIKQGLSRTSNQLSGGLASLLLGKKAIDDELLEEIETLLLMADVGVE
ATTDIIDDLTARVARKQLADSDALYAALRQSLADLLLDVEAPLDVECAQKPFVILVVGVNGVGKTTTIGKLAKRFQNQGK
SVMLAAGDTFRAAAVEQLQVWGERNKVPVVAQHTGADSASVIYDAVQSAQARQIDVVIADTAGRLHNKSNLMEELAKVKR
VMAKLDDSAPHEVLLVLDAGTGQNALSQAGHFKEAAGVTGLALTKLDGTAKGGIIFALSKQYGLPVRYIGVGEGIDDLQP
FQATSFIDALFGTE

Nucleotide

• Length: 1005 bp

>NTDB_id=961682 WKI14_RS01115 WP_015820929.1 266218..267222(+) (pilA) [Teredinibacter turnerae strain SR01903]
ATGTTTTTTAAGAGCAAAAAAAGCAAATCCGAAAGCCCCGAGAGCGAAGCTGTGGCCCAGCCAGCGGAGAAGCCCACAGA
AAAGGTCAGCTTCTTTACCCGCATCAAACAGGGCTTATCCCGCACCAGTAACCAGCTGTCTGGCGGGCTGGCGAGTTTGC
TGCTGGGCAAAAAGGCTATTGACGACGAGCTGCTTGAAGAAATCGAAACTCTGTTGTTGATGGCCGATGTAGGGGTTGAA
GCCACCACCGATATTATTGACGATCTCACCGCGCGAGTTGCACGCAAGCAGTTGGCCGATTCGGATGCGCTCTACGCGGC
GTTGCGCCAGTCCCTCGCCGACTTGTTGCTGGATGTTGAAGCGCCACTGGATGTGGAGTGCGCACAAAAGCCATTCGTTA
TTCTTGTGGTCGGCGTCAATGGGGTGGGCAAAACCACCACCATCGGCAAACTCGCCAAACGTTTTCAAAACCAAGGCAAA
TCCGTGATGTTAGCCGCCGGCGATACTTTCCGCGCTGCAGCGGTGGAGCAACTGCAGGTGTGGGGCGAGCGCAATAAGGT
GCCCGTGGTGGCTCAGCACACGGGCGCGGATAGCGCATCTGTTATTTACGATGCTGTACAGTCAGCGCAGGCGCGGCAAA
TCGATGTGGTGATCGCAGACACCGCCGGTCGCTTGCACAACAAGAGCAATCTGATGGAGGAACTGGCCAAGGTCAAACGG
GTCATGGCCAAGCTGGATGACAGCGCACCGCATGAAGTGCTTTTGGTGTTAGACGCGGGTACCGGCCAGAATGCGCTGTC
ACAGGCGGGGCATTTCAAAGAGGCTGCAGGTGTGACCGGGCTGGCGCTGACCAAGCTGGATGGCACAGCGAAAGGCGGTA
TTATCTTTGCTCTCAGCAAACAGTATGGCCTGCCGGTGCGCTATATCGGTGTCGGCGAAGGCATAGACGATTTGCAGCCA
TTCCAGGCCACTAGCTTTATCGATGCACTGTTCGGGACAGAATAA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (131-331)

• SRP54-type protein, helical bundle domain (SRP54_N) (46-112)

3D structure

• AlphaFold DB: C6AQY9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	54.747	94.611	0.518