Detailed information NTG0961672

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: WKI13_RS19905
• Genome accession: NZ_CP149817
• Coordinates: 4974410..4975414 (-)
• Length: 334 a.a.
• NCBI ID: WP_018274993.1
• Uniprot ID: -
• Organism: Teredinibacter turnerae strain T7902
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4969410..4980414

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WKI13_RS19875 (WKI13_19875)	-	4969550..4970116 (-)	567	WP_018274988.1	TIGR02444 family protein	-
WKI13_RS19880 (WKI13_19880)	trmB	4970538..4971227 (-)	690	WP_018274989.1	tRNA (guanosine(46)-N7)-methyltransferase TrmB	-
WKI13_RS19885 (WKI13_19885)	-	4971262..4971696 (-)	435	WP_018274990.1	DUF423 domain-containing protein	-
WKI13_RS19890 (WKI13_19890)	rpoH	4971713..4972567 (-)	855	WP_018274991.1	RNA polymerase sigma factor RpoH	-
WKI13_RS19895 (WKI13_19895)	ftsX	4972734..4973708 (-)	975	WP_018274992.1	permease-like cell division protein FtsX	-
WKI13_RS19900 (WKI13_19900)	ftsE	4973710..4974387 (-)	678	WP_015817317.1	cell division ATP-binding protein FtsE	-
WKI13_RS19905 (WKI13_19905)	pilA	4974410..4975414 (-)	1005	WP_018274993.1	signal recognition particle-docking protein FtsY	Machinery gene
WKI13_RS19910 (WKI13_19910)	rsmD	4975475..4976050 (+)	576	WP_018274994.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
WKI13_RS19915 (WKI13_19915)	coaD	4976161..4976649 (+)	489	WP_018274995.1	pantetheine-phosphate adenylyltransferase	-
WKI13_RS19920 (WKI13_19920)	-	4976746..4979631 (+)	2886	WP_018274996.1	class I adenylate cyclase	-
WKI13_RS19925 (WKI13_19925)	-	4979711..4979926 (-)	216	WP_015818151.1	hypothetical protein	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 35523.60 Da
• Isoelectric Point: 5.2598

>NTDB_id=961672 WKI13_RS19905 WP_018274993.1 4974410..4975414(-) (pilA) [Teredinibacter turnerae strain T7902]
MFFKSKKSKSESPESEAVAQPAEKPTEKVSFFTRIKQGLSRTSNQLSGGLASLLLGKKAIDDELLEEIETLLLMADVGVE
ATTDIIDDLTARVARKQLADSDALYAALRQSLADLLLDVEAPLDVECAQKPFVILVVGVNGVGKTTTIGKLAKRFQNQGK
SVMLAAGDTFRAAAVEQLQVWGERNKVPVVAQHTGADSASVIYDAVQSAQARQIDVVIADTAGRLHNKSNLMEELAKVKR
VMAKLDDSAPHEVLLVLDAGTGQNALSQAGHFKEAAGVTGLALTKLDGTAKGGIIFALSKQHGLPVRYIGVGEGIDDLQP
FQATSFIDALFGTE

Nucleotide

• Length: 1005 bp

>NTDB_id=961672 WKI13_RS19905 WP_018274993.1 4974410..4975414(-) (pilA) [Teredinibacter turnerae strain T7902]
ATGTTTTTTAAGAGCAAAAAAAGCAAATCCGAAAGCCCTGAGAGCGAAGCTGTGGCCCAGCCAGCGGAGAAGCCCACAGA
AAAGGTCAGCTTCTTTACCCGCATCAAACAGGGCTTATCCCGCACCAGCAACCAGCTGTCCGGCGGGCTGGCGAGTTTGT
TACTGGGCAAAAAGGCCATCGACGACGAGCTGCTTGAAGAAATCGAAACCCTGTTGTTGATGGCCGATGTGGGGGTTGAA
GCCACCACCGATATTATCGACGATCTCACCGCGCGGGTTGCACGCAAGCAGTTGGCCGATTCGGACGCGCTTTACGCCGC
GCTGCGTCAATCCCTCGCCGACTTGTTGCTGGATGTGGAAGCGCCACTGGATGTGGAGTGCGCACAAAAGCCCTTCGTTA
TTCTTGTGGTGGGCGTCAATGGGGTGGGCAAAACCACCACCATCGGCAAGCTCGCCAAACGTTTTCAAAACCAGGGCAAA
TCCGTAATGTTGGCCGCCGGCGATACTTTCCGCGCTGCGGCGGTGGAGCAATTGCAGGTGTGGGGCGAGCGCAACAAGGT
ACCCGTGGTGGCTCAGCACACGGGCGCGGACAGCGCATCGGTTATCTACGATGCGGTACAGTCGGCACAGGCACGTCAAA
TCGATGTGGTGATCGCAGATACTGCCGGTCGTTTACACAATAAGAGTAACCTGATGGAGGAACTGGCCAAGGTCAAGCGA
GTGATGGCCAAGCTGGATGACAGTGCGCCGCATGAAGTGCTTTTGGTGCTGGACGCGGGTACTGGCCAAAATGCGCTGTC
GCAGGCAGGCCATTTCAAAGAGGCGGCAGGTGTGACCGGGCTGGCGCTGACCAAACTGGATGGCACCGCGAAAGGCGGTA
TTATCTTCGCCCTAAGCAAACAGCACGGCCTGCCGGTGCGCTATATCGGTGTCGGCGAAGGCATAGACGATTTGCAGCCG
TTCCAGGCTACCAGCTTTATAGATGCGCTGTTCGGGACAGAATAA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (46-112)

• SRP54-type protein, GTPase domain (SRP54) (131-331)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	54.747	94.611	0.518