Detailed information    

insolico Bioinformatically predicted

Overview

Name   tonB2   Type   Machinery gene
Locus tag   WKW51_RS02485 Genome accession   NZ_CP149800
Coordinates   505844..506728 (+) Length   294 a.a.
NCBI ID   WP_000914769.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain AB7276     
Function   assembly of type IV pilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 500844..511728
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WKW51_RS02460 (WKW51_02460) - 501242..502489 (-) 1248 WP_000893467.1 YihY family inner membrane protein -
  WKW51_RS02465 (WKW51_02465) wrbA 502777..503370 (+) 594 WP_001183352.1 NAD(P)H:quinone oxidoreductase -
  WKW51_RS02470 (WKW51_02470) - 503423..503998 (-) 576 WP_000543071.1 xanthine phosphoribosyltransferase -
  WKW51_RS02475 (WKW51_02475) - 504071..504784 (-) 714 WP_000201544.1 DUF3108 domain-containing protein -
  WKW51_RS02480 (WKW51_02480) - 504942..505613 (-) 672 WP_001193960.1 hypothetical protein -
  WKW51_RS02485 (WKW51_02485) tonB2 505844..506728 (+) 885 WP_000914769.1 energy transducer TonB Machinery gene
  WKW51_RS02490 (WKW51_02490) ybeY 506818..507294 (-) 477 WP_000703571.1 rRNA maturation RNase YbeY -
  WKW51_RS02495 (WKW51_02495) - 507304..508392 (-) 1089 WP_000122983.1 PhoH family protein -
  WKW51_RS02500 (WKW51_02500) miaB 508430..509881 (-) 1452 WP_000218142.1 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB -

Sequence

Protein


Download         Length: 294 a.a.        Molecular weight: 33728.64 Da        Isoelectric Point: 9.4087

>NTDB_id=961415 WKW51_RS02485 WP_000914769.1 505844..506728(+) (tonB2) [Acinetobacter baumannii strain AB7276]
MLKKRSLSIEPFYYWWQDRVFIAAIILAILLHIFMLLIHFAMPTPSEQSTKEIAISIRPNEDVIKHADFLAQADQQGSGA
FREAHRMSSNSPAPMPSDASTGEAQLETLEKMQQQRELKFEEKVLMTVLSWQKQAEESQRKKALEQLQSQFQAKAAMVAS
LEAQYLQRQQDFSRQQKIKTVDGIQAKKDASAAYLDKFREKVELYGNRYYPEEAKQQQLKGEVRLMVILNAQGGIRAIRL
LESSGHPVLDEAAKASVRRGAPFGRFDANMKDISELRIIRTWRFDPAQAEFEVH

Nucleotide


Download         Length: 885 bp        

>NTDB_id=961415 WKW51_RS02485 WP_000914769.1 505844..506728(+) (tonB2) [Acinetobacter baumannii strain AB7276]
ATGTTGAAAAAAAGAAGTCTATCCATAGAGCCTTTTTATTATTGGTGGCAAGACCGAGTCTTTATCGCTGCAATAATATT
AGCAATCTTACTGCATATTTTTATGTTGCTCATCCATTTTGCGATGCCTACGCCGTCAGAACAATCGACTAAAGAAATTG
CAATATCGATTCGTCCTAATGAAGATGTGATCAAACATGCAGACTTTTTAGCTCAAGCCGATCAACAAGGTTCAGGGGCT
TTTCGGGAAGCTCATCGGATGTCGAGTAACTCTCCAGCGCCTATGCCAAGTGATGCTTCAACAGGAGAAGCTCAGCTAGA
AACTTTAGAAAAAATGCAGCAACAAAGAGAACTTAAATTTGAAGAAAAAGTACTCATGACTGTATTGAGTTGGCAGAAAC
AAGCAGAGGAGAGCCAAAGAAAAAAAGCACTTGAACAATTACAAAGTCAGTTTCAGGCAAAAGCTGCCATGGTAGCGAGT
CTTGAAGCTCAGTATTTACAACGTCAGCAAGATTTTAGTCGCCAACAAAAAATAAAAACAGTAGATGGTATTCAAGCCAA
GAAAGATGCGTCGGCAGCTTATCTAGATAAATTTCGTGAAAAAGTAGAGCTTTATGGCAACCGTTATTATCCAGAAGAAG
CGAAACAGCAACAGTTAAAAGGTGAAGTTCGCCTTATGGTAATTTTGAATGCTCAAGGGGGAATTCGTGCAATTCGTTTG
CTTGAAAGCTCAGGTCATCCAGTTCTAGATGAAGCAGCAAAGGCATCGGTACGGCGTGGAGCGCCGTTTGGCCGTTTTGA
TGCAAATATGAAAGATATTTCAGAGCTTCGTATTATTCGTACATGGCGTTTTGATCCAGCTCAAGCTGAATTTGAAGTTC
ATTAA

Domains

Predicted by InterproScan.

Gram-negative bacterial TonB protein C-terminal (TonB_C)

(207-284)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  tonB2 Acinetobacter baumannii D1279779

98.299

100

0.983