Detailed information NTG0961335

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACI3MB_RS21045
• Genome accession: NZ_CP173591
• Coordinates: 4041426..4042451 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 98193
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4036426..4047451

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACI3MB_RS21015 (ACI3MB_21025)	zapB	4036510..4036755 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ACI3MB_RS21020 (ACI3MB_21030)	rraA	4036840..4037325 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACI3MB_RS21025 (ACI3MB_21035)	menA	4037418..4038344 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACI3MB_RS21030 (ACI3MB_21040)	hslU	4038411..4039742 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ACI3MB_RS21035 (ACI3MB_21045)	hslV	4039752..4040282 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACI3MB_RS21040 (ACI3MB_21050)	ftsN	4040375..4041334 (-)	960	WP_000068828.1	cell division protein FtsN	-
ACI3MB_RS21045 (ACI3MB_21055)	cytR	4041426..4042451 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACI3MB_RS21050 (ACI3MB_21060)	priA	4042607..4044805 (-)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
ACI3MB_RS21055 (ACI3MB_21065)	rpmE	4045008..4045220 (+)	213	WP_000710769.1	50S ribosomal protein L31	-
ACI3MB_RS21060 (ACI3MB_21070)	-	4045275..4045898 (-)	624	WP_000720774.1	TIGR02117 family protein	-
ACI3MB_RS21065 (ACI3MB_21075)	yiiX	4045905..4046513 (-)	609	WP_000797341.1	YiiX family permuted papain-like enzyme	-
ACI3MB_RS21070 (ACI3MB_21080)	metJ	4046697..4047014 (-)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=961335 ACI3MB_RS21045 WP_000644904.1 4041426..4042451(-) (cytR) [Escherichia coli strain 98193]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=961335 ACI3MB_RS21045 WP_000644904.1 4041426..4042451(-) (cytR) [Escherichia coli strain 98193]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628