Detailed information NTG0961186

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACI3MS_RS03985
• Genome accession: NZ_CP173588
• Coordinates: 442275..443300 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain 98194
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 437275..448300

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACI3MS_RS03965 (ACI3MS_03960)	metJ	438460..438777 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ACI3MS_RS03970 (ACI3MS_03965)	yiiX	438837..439445 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
ACI3MS_RS03975 (ACI3MS_03970)	rpmE	439506..439718 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACI3MS_RS03980 (ACI3MS_03975)	priA	439921..442119 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
ACI3MS_RS03985 (ACI3MS_03980)	cytR	442275..443300 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
ACI3MS_RS03990 (ACI3MS_03985)	ftsN	443392..444351 (+)	960	WP_000068834.1	cell division protein FtsN	-
ACI3MS_RS03995 (ACI3MS_03990)	hslV	444444..444974 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACI3MS_RS04000 (ACI3MS_03995)	hslU	444984..446315 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ACI3MS_RS04005 (ACI3MS_04000)	menA	446382..447308 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACI3MS_RS04010 (ACI3MS_04005)	rraA	447401..447886 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACI3MS_RS04015 (ACI3MS_04010)	zapB	447971..448216 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=961186 ACI3MS_RS03985 WP_000644908.1 442275..443300(+) (cytR) [Escherichia coli strain 98194]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=961186 ACI3MS_RS03985 WP_000644908.1 442275..443300(+) (cytR) [Escherichia coli strain 98194]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625