Detailed information NTG0961102

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACI3M2_RS04065
• Genome accession: NZ_CP173582
• Coordinates: 844983..846008 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 98195
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 839983..851008

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACI3M2_RS04045 (ACI3M2_04045)	metJ	841044..841361 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ACI3M2_RS04050 (ACI3M2_04050)	yiiX	841545..842153 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
ACI3M2_RS04055 (ACI3M2_04055)	rpmE	842214..842426 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACI3M2_RS04060 (ACI3M2_04060)	priA	842629..844827 (+)	2199	WP_001333520.1	primosomal protein N'	Machinery gene
ACI3M2_RS04065 (ACI3M2_04065)	cytR	844983..846008 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACI3M2_RS04070 (ACI3M2_04070)	ftsN	846100..847059 (+)	960	WP_000068828.1	cell division protein FtsN	-
ACI3M2_RS04075 (ACI3M2_04075)	hslV	847152..847682 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACI3M2_RS04080 (ACI3M2_04080)	hslU	847692..849023 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ACI3M2_RS04085 (ACI3M2_04085)	menA	849090..850016 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACI3M2_RS04090 (ACI3M2_04090)	rraA	850109..850594 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACI3M2_RS04095 (ACI3M2_04095)	zapB	850679..850924 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=961102 ACI3M2_RS04065 WP_000644904.1 844983..846008(+) (cytR) [Escherichia coli strain 98195]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=961102 ACI3M2_RS04065 WP_000644904.1 844983..846008(+) (cytR) [Escherichia coli strain 98195]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628