Detailed information NTG0960969

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: ACI3NC_RS17145
• Genome accession: NZ_CP173570
• Coordinates: 3282877..3283860 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196487.1
• Uniprot ID: -
• Organism: Escherichia coli strain 98198
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3277877..3288860

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACI3NC_RS17130 (ACI3NC_17115)	dppA	3279177..3280784 (+)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-
ACI3NC_RS17135 (ACI3NC_17120)	dppB	3280935..3281954 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
ACI3NC_RS17140 (ACI3NC_17125)	dppC	3281964..3282866 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
ACI3NC_RS17145 (ACI3NC_17130)	amiE	3282877..3283860 (+)	984	WP_001196487.1	dipeptide ABC transporter ATP-binding protein	Regulator
ACI3NC_RS17150 (ACI3NC_17135)	dppF	3283857..3284861 (+)	1005	WP_000103574.1	dipeptide ABC transporter ATP-binding subunit DppF	-
ACI3NC_RS17155 (ACI3NC_17140)	yhjV	3284891..3286162 (-)	1272	WP_001521562.1	aromatic amino acid transport family protein	-
ACI3NC_RS17160 (ACI3NC_17145)	-	3286638..3286745 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
ACI3NC_RS17165 (ACI3NC_17150)	-	3287122..3287229 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
ACI3NC_RS17170 (ACI3NC_17155)	-	3287605..3287712 (+)	108	WP_001521561.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35860.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=960969 ACI3NC_RS17145 WP_001196487.1 3282877..3283860(+) (amiE) [Escherichia coli strain 98198]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLSDGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=960969 ACI3NC_RS17145 WP_001196487.1 3282877..3283860(+) (amiE) [Escherichia coli strain 98198]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAGCCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGTTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTGATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCCCACGCC
ATCTTCCATGCGCCGCGTCATCCATATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCTCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.614	98.165	0.428
amiE	Streptococcus thermophilus LMG 18311	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMD-9	43.302	98.165	0.425
oppD	Streptococcus mutans UA159	41.693	97.554	0.407