Detailed information NTG0960861

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACI3MJ_RS09680
• Genome accession: NZ_CP173567
• Coordinates: 1644784..1645809 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 98200
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1639784..1650809

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACI3MJ_RS09670 (ACI3MJ_09655)	rpmE	1642015..1642227 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACI3MJ_RS09675 (ACI3MJ_09660)	priA	1642430..1644628 (+)	2199	WP_001590975.1	primosomal protein N'	Machinery gene
ACI3MJ_RS09680 (ACI3MJ_09665)	cytR	1644784..1645809 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACI3MJ_RS09685 (ACI3MJ_09670)	ftsN	1645901..1646860 (+)	960	WP_000068834.1	cell division protein FtsN	-
ACI3MJ_RS09690 (ACI3MJ_09675)	hslV	1646953..1647483 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACI3MJ_RS09695 (ACI3MJ_09680)	hslU	1647493..1648824 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ACI3MJ_RS09700 (ACI3MJ_09685)	menA	1648891..1649817 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACI3MJ_RS09705 (ACI3MJ_09690)	rraA	1649910..1650395 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACI3MJ_RS09710 (ACI3MJ_09695)	zapB	1650480..1650725 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=960861 ACI3MJ_RS09680 WP_000644904.1 1644784..1645809(+) (cytR) [Escherichia coli strain 98200]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=960861 ACI3MJ_RS09680 WP_000644904.1 1644784..1645809(+) (cytR) [Escherichia coli strain 98200]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628