Detailed information NTG0960806

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACI3M3_RS11195
• Genome accession: NZ_CP173561
• Coordinates: 2301392..2302417 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 98201
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2296392..2307417

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACI3M3_RS11165 (ACI3M3_11165)	zapB	2296476..2296721 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ACI3M3_RS11170 (ACI3M3_11170)	rraA	2296806..2297291 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACI3M3_RS11175 (ACI3M3_11175)	menA	2297384..2298310 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACI3M3_RS11180 (ACI3M3_11180)	hslU	2298377..2299708 (-)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
ACI3M3_RS11185 (ACI3M3_11185)	hslV	2299718..2300248 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACI3M3_RS11190 (ACI3M3_11190)	ftsN	2300341..2301300 (-)	960	WP_000068834.1	cell division protein FtsN	-
ACI3M3_RS11195 (ACI3M3_11195)	cytR	2301392..2302417 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACI3M3_RS11200 (ACI3M3_11200)	priA	2302573..2304771 (-)	2199	WP_001315935.1	primosomal protein N'	Machinery gene
ACI3M3_RS11205 (ACI3M3_11205)	rpmE	2304974..2305186 (+)	213	WP_000710769.1	50S ribosomal protein L31	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=960806 ACI3M3_RS11195 WP_000644904.1 2301392..2302417(-) (cytR) [Escherichia coli strain 98201]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=960806 ACI3M3_RS11195 WP_000644904.1 2301392..2302417(-) (cytR) [Escherichia coli strain 98201]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTCGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628