Detailed information NTG0960490

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACI3M5_RS22575
• Genome accession: NZ_CP173544
• Coordinates: 4095466..4096491 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 98206
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4090466..4101491

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACI3M5_RS22545 (ACI3M5_22545)	zapB	4090550..4090795 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ACI3M5_RS22550 (ACI3M5_22550)	rraA	4090880..4091365 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACI3M5_RS22555 (ACI3M5_22555)	menA	4091458..4092384 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACI3M5_RS22560 (ACI3M5_22560)	hslU	4092451..4093782 (-)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
ACI3M5_RS22565 (ACI3M5_22565)	hslV	4093792..4094322 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACI3M5_RS22570 (ACI3M5_22570)	ftsN	4094415..4095374 (-)	960	WP_000068834.1	cell division protein FtsN	-
ACI3M5_RS22575 (ACI3M5_22575)	cytR	4095466..4096491 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACI3M5_RS22580 (ACI3M5_22580)	priA	4096647..4098845 (-)	2199	WP_001324365.1	primosomal protein N'	Machinery gene
ACI3M5_RS22585 (ACI3M5_22585)	rpmE	4099048..4099260 (+)	213	WP_000710769.1	50S ribosomal protein L31	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=960490 ACI3M5_RS22575 WP_000644904.1 4095466..4096491(-) (cytR) [Escherichia coli strain 98206]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=960490 ACI3M5_RS22575 WP_000644904.1 4095466..4096491(-) (cytR) [Escherichia coli strain 98206]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGCTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCACTGTGTCACTATCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTAA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628