Detailed information    

insolico Bioinformatically predicted

Overview

Name   degQ   Type   Regulator
Locus tag   WKI55_RS15915 Genome accession   NZ_CP149651
Coordinates   3108584..3108724 (-) Length   46 a.a.
NCBI ID   WP_003152043.1    Uniprot ID   A3KLB4
Organism   Bacillus velezensis strain MJ01     
Function   modification of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 3103584..3113724
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WKI55_RS15890 (WKI55_15890) - 3103911..3104294 (-) 384 WP_017419422.1 hotdog fold thioesterase -
  WKI55_RS15895 (WKI55_15895) comA 3104316..3104960 (-) 645 WP_014418762.1 response regulator transcription factor Regulator
  WKI55_RS15900 (WKI55_15900) comP 3105041..3107347 (-) 2307 WP_017419423.1 sensor histidine kinase Regulator
  WKI55_RS15905 (WKI55_15905) comX 3107366..3107542 (-) 177 WP_017419424.1 competence pheromone ComX -
  WKI55_RS15910 (WKI55_15910) - 3107557..3108453 (-) 897 WP_017419425.1 polyprenyl synthetase family protein -
  WKI55_RS15915 (WKI55_15915) degQ 3108584..3108724 (-) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  WKI55_RS15920 (WKI55_15920) - 3109189..3109530 (+) 342 WP_110085235.1 hypothetical protein -
  WKI55_RS15925 (WKI55_15925) - 3109537..3110760 (-) 1224 WP_014418766.1 EAL and HDOD domain-containing protein -
  WKI55_RS15930 (WKI55_15930) - 3110890..3112356 (-) 1467 WP_014418767.1 nicotinate phosphoribosyltransferase -
  WKI55_RS15935 (WKI55_15935) - 3112374..3112925 (-) 552 WP_017419426.1 isochorismatase family cysteine hydrolase -
  WKI55_RS15940 (WKI55_15940) - 3113022..3113420 (-) 399 WP_003152031.1 DUF1694 domain-containing protein -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5518.30 Da        Isoelectric Point: 4.9432

>NTDB_id=960446 WKI55_RS15915 WP_003152043.1 3108584..3108724(-) (degQ) [Bacillus velezensis strain MJ01]
MENKLEEVKQLLFRLENDIRETTDSLRNINKSIDQLDKFSYAMKIS

Nucleotide


Download         Length: 141 bp        

>NTDB_id=960446 WKI55_RS15915 WP_003152043.1 3108584..3108724(-) (degQ) [Bacillus velezensis strain MJ01]
GTGGAAAACAAATTAGAAGAAGTAAAGCAATTATTATTCCGACTTGAAAATGATATCAGAGAAACAACCGACTCATTACG
AAACATTAACAAAAGCATTGATCAGCTCGATAAATTCTCATATGCAATGAAAATTTCTTAA

Domains

Predicted by InterproScan.

DegQ (SacQ) family (DegQ)

(1-46)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3KLB4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  degQ Bacillus subtilis subsp. subtilis str. 168

89.13

100

0.891