Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   WKI55_RS05380 Genome accession   NZ_CP149651
Coordinates   1044366..1044557 (+) Length   63 a.a.
NCBI ID   WP_003155061.1    Uniprot ID   A0AAE2TKK9
Organism   Bacillus velezensis strain MJ01     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1039366..1049557
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WKI55_RS05350 (WKI55_05350) argF 1040219..1041188 (+) 970 Protein_1004 ornithine carbamoyltransferase -
  WKI55_RS05355 (WKI55_05355) - 1041264..1041443 (+) 180 WP_003155070.1 YjzC family protein -
  WKI55_RS05360 (WKI55_05360) - 1041480..1041665 (-) 186 WP_007409129.1 YjzD family protein -
  WKI55_RS05365 (WKI55_05365) - 1041926..1042660 (+) 735 WP_014417405.1 hypothetical protein -
  WKI55_RS05370 (WKI55_05370) - 1042743..1043309 (+) 567 WP_032863798.1 hypothetical protein -
  WKI55_RS05375 (WKI55_05375) med 1043400..1044353 (+) 954 WP_014417407.1 BMP family ABC transporter substrate-binding protein Regulator
  WKI55_RS05380 (WKI55_05380) comZ 1044366..1044557 (+) 192 WP_003155061.1 ComZ family protein Regulator
  WKI55_RS05385 (WKI55_05385) - 1044586..1044804 (-) 219 WP_007409123.1 hypothetical protein -
  WKI55_RS05390 (WKI55_05390) - 1044972..1045910 (+) 939 WP_339078618.1 beta-ketoacyl-ACP synthase III -
  WKI55_RS05395 (WKI55_05395) fabF 1045933..1047171 (+) 1239 WP_012117277.1 beta-ketoacyl-ACP synthase II -
  WKI55_RS05400 (WKI55_05400) - 1047255..1048040 (+) 786 WP_017417447.1 DUF2268 domain-containing protein -
  WKI55_RS05405 (WKI55_05405) - 1048214..1049200 (+) 987 WP_017417448.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7203.33 Da        Isoelectric Point: 4.2259

>NTDB_id=960408 WKI55_RS05380 WP_003155061.1 1044366..1044557(+) (comZ) [Bacillus velezensis strain MJ01]
MQHEKSLEFMQIAMKYLPEAKAELEKSGIDLSMEMIQPFMDLFTSVMAEAYELGRSDAGELNK

Nucleotide


Download         Length: 192 bp        

>NTDB_id=960408 WKI55_RS05380 WP_003155061.1 1044366..1044557(+) (comZ) [Bacillus velezensis strain MJ01]
ATGCAGCATGAAAAGTCTCTTGAATTTATGCAGATCGCGATGAAATACCTGCCGGAAGCAAAGGCGGAGCTTGAGAAATC
CGGCATAGATCTGTCTATGGAAATGATTCAGCCGTTTATGGACCTGTTTACATCGGTCATGGCGGAAGCGTATGAGCTTG
GCAGATCTGATGCCGGGGAGCTGAATAAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

86.207

92.063

0.794