Detailed information NTG0960397

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: WKI55_RS01515
• Genome accession: NZ_CP149651
• Coordinates: 308954..310102 (+)
• Length: 382 a.a.
• NCBI ID: WP_003156336.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain MJ01
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 303954..315102

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WKI55_RS01495 (WKI55_01495)	-	304354..305037 (-)	684	WP_014416899.1	ABC transporter ATP-binding protein	-
WKI55_RS01500 (WKI55_01500)	-	305052..306485 (-)	1434	WP_339075927.1	ABC transporter permease	-
WKI55_RS01505 (WKI55_01505)	-	306698..307381 (+)	684	WP_014416901.1	response regulator transcription factor	-
WKI55_RS01510 (WKI55_01510)	-	307368..308795 (+)	1428	WP_106067998.1	HAMP domain-containing sensor histidine kinase	-
WKI55_RS01515 (WKI55_01515)	rapC	308954..310102 (+)	1149	WP_003156336.1	Rap family tetratricopeptide repeat protein	Regulator
WKI55_RS01520 (WKI55_01520)	phrC	310086..310205 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
WKI55_RS01525 (WKI55_01525)	-	310354..310449 (-)	96	WP_012116800.1	YjcZ family sporulation protein	-
WKI55_RS01530 (WKI55_01530)	-	310543..311907 (-)	1365	WP_339075928.1	aspartate kinase	-
WKI55_RS01535 (WKI55_01535)	ceuB	312321..313274 (+)	954	WP_014416904.1	ABC transporter permease	Machinery gene
WKI55_RS01540 (WKI55_01540)	-	313264..314211 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
WKI55_RS01545 (WKI55_01545)	-	314205..314963 (+)	759	WP_022552588.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45521.82 Da
• Isoelectric Point: 5.0732

>NTDB_id=960397 WKI55_RS01515 WP_003156336.1 308954..310102(+) (rapC) [Bacillus velezensis strain MJ01]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDRMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEEK
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=960397 WKI55_RS01515 WP_003156336.1 308954..310102(+) (rapC) [Bacillus velezensis strain MJ01]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAAGCCGAGATCAAACAAGAGCTTGACCGTATGGAGCCTGATTCAAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACGTATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGACGAGGAAAAA
ATCAGCGCATGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.199	100	0.822
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568