Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   WKI56_RS07270 Genome accession   NZ_CP149650
Coordinates   1391285..1391881 (+) Length   198 a.a.
NCBI ID   WP_003154591.1    Uniprot ID   -
Organism   Bacillus velezensis strain MJ02     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1386285..1396881
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WKI56_RS07240 (WKI56_07240) - 1386499..1386954 (+) 456 WP_014417614.1 flavodoxin -
  WKI56_RS07245 (WKI56_07245) dapD 1387036..1387746 (+) 711 WP_007409623.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  WKI56_RS07250 (WKI56_07250) - 1387817..1388941 (+) 1125 WP_017417680.1 N-acetyldiaminopimelate deacetylase -
  WKI56_RS07255 (WKI56_07255) - 1389002..1389247 (+) 246 WP_003154596.1 YkuS family protein -
  WKI56_RS07260 (WKI56_07260) - 1389281..1390087 (-) 807 WP_017417681.1 mechanosensitive ion channel family protein -
  WKI56_RS07265 (WKI56_07265) - 1390375..1390833 (+) 459 WP_017417682.1 TlpA disulfide reductase family protein -
  WKI56_RS07270 (WKI56_07270) rok 1391285..1391881 (+) 597 WP_003154591.1 transcriptional regulator Rok Regulator
  WKI56_RS07275 (WKI56_07275) - 1391902..1392894 (-) 993 WP_014417619.1 hypothetical protein -
  WKI56_RS07280 (WKI56_07280) - 1393040..1393642 (+) 603 WP_025649507.1 molybdenum cofactor guanylyltransferase -
  WKI56_RS07285 (WKI56_07285) - 1393694..1394713 (+) 1020 WP_017417685.1 molybdopterin-synthase adenylyltransferase MoeB -
  WKI56_RS07290 (WKI56_07290) glp 1394731..1396023 (+) 1293 WP_339078499.1 gephyrin-like molybdotransferase Glp -
  WKI56_RS07295 (WKI56_07295) mobB 1395984..1396505 (+) 522 WP_029973679.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 198 a.a.        Molecular weight: 22525.57 Da        Isoelectric Point: 9.6909

>NTDB_id=960344 WKI56_RS07270 WP_003154591.1 1391285..1391881(+) (rok) [Bacillus velezensis strain MJ02]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDNTGSLSDTKKEFRPEKKSDSLPVLAELAAQEMRSYQKPQ
TQPQSSQPQMQSITSLPAGIPDGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFM
QSLIKMYPEVKKPYRGQYILEGEISQETAETANDTAAE

Nucleotide


Download         Length: 597 bp        

>NTDB_id=960344 WKI56_RS07270 WP_003154591.1 1391285..1391881(+) (rok) [Bacillus velezensis strain MJ02]
ATGTTTAATGAAAGAGAAGCGCTGCGCTTACGTTTAGAACAATTAAACGAAGCAGAGGTAAAAGTCATTCGTGAATATCA
AATAGAACGTGATAAAATATATGCAAAACTGAGAGAATTAGACAATACAGGCAGCCTGTCCGATACAAAAAAAGAGTTTC
GTCCGGAGAAAAAAAGTGACTCTCTCCCGGTGCTTGCAGAGCTTGCGGCACAGGAAATGAGAAGCTATCAAAAGCCGCAG
ACACAGCCTCAATCCTCCCAGCCGCAGATGCAGTCTATTACGTCTCTTCCCGCCGGCATTCCGGACGGTTCTACAAGAAG
AAGAAGAGGGACGGCGAGACCGGGATCAAAAGCGGCAAAACTGCGCGAAGCAGCGATTAAAACGTTGAAACGCCACAATG
CAGCGATCAAAAGTTCCGAACTGCAAAAGGAAATTGAAAAGGAAAGCGGCCTTGAAATTCCTAATATGACAACATTTATG
CAAAGCTTAATTAAAATGTATCCGGAAGTGAAAAAACCATATCGCGGCCAATATATTCTTGAGGGAGAAATTTCTCAGGA
AACAGCAGAAACGGCAAATGATACGGCTGCTGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

86.082

97.98

0.843