Detailed information NTG0960295

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACI3MH_RS07355
• Genome accession: NZ_CP173533
• Coordinates: 1479067..1480092 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 98208
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 1474067..1485092

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACI3MH_RS07325 (ACI3MH_07325)	zapB	1474151..1474396 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ACI3MH_RS07330 (ACI3MH_07330)	rraA	1474481..1474966 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACI3MH_RS07335 (ACI3MH_07335)	menA	1475059..1475985 (-)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACI3MH_RS07340 (ACI3MH_07340)	hslU	1476052..1477383 (-)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
ACI3MH_RS07345 (ACI3MH_07345)	hslV	1477393..1477923 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACI3MH_RS07350 (ACI3MH_07350)	ftsN	1478016..1478975 (-)	960	WP_073545339.1	cell division protein FtsN	-
ACI3MH_RS07355 (ACI3MH_07355)	cytR	1479067..1480092 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACI3MH_RS07360 (ACI3MH_07360)	priA	1480248..1482446 (-)	2199	WP_001324365.1	primosomal protein N'	Machinery gene
ACI3MH_RS07365 (ACI3MH_07365)	rpmE	1482649..1482861 (+)	213	WP_000710769.1	50S ribosomal protein L31	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=960295 ACI3MH_RS07355 WP_000644904.1 1479067..1480092(-) (cytR) [Escherichia coli strain 98208]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=960295 ACI3MH_RS07355 WP_000644904.1 1479067..1480092(-) (cytR) [Escherichia coli strain 98208]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGCTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCACTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628