Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   WKI54_RS14950 Genome accession   NZ_CP149648
Coordinates   2849253..2849717 (-) Length   154 a.a.
NCBI ID   WP_003154622.1    Uniprot ID   A0A9Q3QIJ3
Organism   Bacillus velezensis strain MJ04     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 2844253..2854717
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WKI54_RS14930 (WKI54_14930) - 2844733..2846553 (+) 1821 WP_017417673.1 PAS domain-containing protein -
  WKI54_RS14935 (WKI54_14935) - 2846579..2847748 (-) 1170 WP_007611083.1 aminotransferase A -
  WKI54_RS14940 (WKI54_14940) - 2847949..2848110 (-) 162 WP_007409608.1 hypothetical protein -
  WKI54_RS14945 (WKI54_14945) cheV 2848299..2849210 (+) 912 WP_025649511.1 chemotaxis protein CheV -
  WKI54_RS14950 (WKI54_14950) kre 2849253..2849717 (-) 465 WP_003154622.1 YkyB family protein Regulator
  WKI54_RS14955 (WKI54_14955) - 2849840..2851132 (-) 1293 WP_014417606.1 MFS transporter -
  WKI54_RS14960 (WKI54_14960) - 2851208..2851702 (-) 495 WP_094296114.1 L,D-transpeptidase family protein -
  WKI54_RS14965 (WKI54_14965) - 2851777..2852640 (-) 864 WP_339075713.1 metallophosphoesterase -
  WKI54_RS14970 (WKI54_14970) fadH 2852784..2853548 (+) 765 WP_003154618.1 2,4-dienoyl-CoA reductase -
  WKI54_RS14975 (WKI54_14975) - 2853662..2854210 (+) 549 WP_017417677.1 hypothetical protein -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17784.55 Da        Isoelectric Point: 10.4864

>NTDB_id=960293 WKI54_RS14950 WP_003154622.1 2849253..2849717(-) (kre) [Bacillus velezensis strain MJ04]
MDDHAYSKELQPTIENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSNNPRFSQQQSDVLISIGD
YYFHMPPTKEDFQHLPHLGTLNQSYRNPKAQMSLTKAKNVLQKYVGLKEKPLAANRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=960293 WKI54_RS14950 WP_003154622.1 2849253..2849717(-) (kre) [Bacillus velezensis strain MJ04]
ATGGACGACCACGCTTATTCGAAAGAGCTGCAGCCAACCATCGAGAATCTTTCAAAAGCTGTTTATACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTTTATCTGCTGAAAAAACGGGCATTACAAAAGCTTGTGAAAGAAGGCAAAG
GGAAAAAAATAGGGCTTCACTTTTCAAATAATCCCAGGTTTAGCCAACAGCAGTCAGACGTACTTATCTCTATCGGAGAC
TACTATTTTCACATGCCTCCAACAAAAGAAGACTTCCAGCATCTTCCGCATTTAGGTACGTTAAATCAATCGTACCGCAA
TCCTAAAGCACAAATGTCTTTGACAAAAGCGAAAAACGTATTGCAAAAATATGTGGGCTTAAAGGAAAAACCGCTTGCCG
CCAACAGGCAGCAGCCCGCTTATCATAAACCCGTATTTAAAAAACTTGGTGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(13-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

92.857

100

0.929