Detailed information NTG0960275

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: WKI54_RS09365
• Genome accession: NZ_CP149648
• Coordinates: 1798923..1800071 (+)
• Length: 382 a.a.
• NCBI ID: WP_003156336.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain MJ04
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1793923..1805071

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WKI54_RS09345 (WKI54_09345)	-	1794323..1795006 (-)	684	WP_014416899.1	ABC transporter ATP-binding protein	-
WKI54_RS09350 (WKI54_09350)	-	1795021..1796454 (-)	1434	WP_339075927.1	ABC transporter permease	-
WKI54_RS09355 (WKI54_09355)	-	1796667..1797350 (+)	684	WP_014416901.1	response regulator transcription factor	-
WKI54_RS09360 (WKI54_09360)	-	1797337..1798764 (+)	1428	WP_106067998.1	HAMP domain-containing sensor histidine kinase	-
WKI54_RS09365 (WKI54_09365)	rapC	1798923..1800071 (+)	1149	WP_003156336.1	Rap family tetratricopeptide repeat protein	Regulator
WKI54_RS09370 (WKI54_09370)	phrC	1800055..1800174 (+)	120	WP_003156334.1	PhrC/PhrF family phosphatase-inhibitory pheromone	Regulator
WKI54_RS09375 (WKI54_09375)	-	1800323..1800418 (-)	96	WP_012116800.1	YjcZ family sporulation protein	-
WKI54_RS09380 (WKI54_09380)	-	1800512..1801876 (-)	1365	WP_339075928.1	aspartate kinase	-
WKI54_RS09385 (WKI54_09385)	ceuB	1802290..1803243 (+)	954	WP_014416904.1	ABC transporter permease	Machinery gene
WKI54_RS09390 (WKI54_09390)	-	1803233..1804180 (+)	948	WP_014416905.1	iron chelate uptake ABC transporter family permease subunit	-
WKI54_RS09395 (WKI54_09395)	-	1804174..1804932 (+)	759	WP_022552588.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45521.82 Da
• Isoelectric Point: 5.0732

>NTDB_id=960275 WKI54_RS09365 WP_003156336.1 1798923..1800071(+) (rapC) [Bacillus velezensis strain MJ04]
MKSGLIPSSAVGQKINEWYRYIRTFSVPDAEILKAEIKQELDRMEPDSNLVLYYSLMEFRHQLMLDYLEPLEKLKIEDQP
TLSEILDNIDNSQAGLKGLLDYYVNFFKGMFEFDKREFISAITYYKQAEKKLAFVSDHVERAEFYFKVAEAYYHMKQTYF
SLIHIKNAYEIYVEQDTYNVRIIQCHFVFGVNLMDERRFEQAAKHFQHALQMAEKEQKAQLVGRALYNLGLCYYNQDRIG
EAIPYFERAVDTFESQRIVNSLPQAYFLITLIYFKLGKKEKASEYHKRGYEYAKETDDPVYTVKFEWLQALYQAKPDEEK
ISACFRYLEDKNLYADIEDLALEAAKYYYEQNCFKISSDYFLKVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=960275 WKI54_RS09365 WP_003156336.1 1798923..1800071(+) (rapC) [Bacillus velezensis strain MJ04]
ATGAAGAGCGGGTTAATTCCTTCTTCAGCAGTCGGGCAGAAAATTAACGAGTGGTATCGATACATCAGAACATTCAGCGT
GCCGGATGCGGAGATCTTGAAAGCCGAGATCAAACAAGAGCTTGACCGTATGGAGCCTGATTCAAACTTAGTGCTTTATT
ATTCCCTCATGGAATTTCGCCATCAGCTGATGCTGGACTACTTGGAGCCGCTGGAAAAACTGAAGATAGAAGACCAGCCG
ACCCTGTCGGAAATTCTTGATAACATTGATAACAGCCAGGCCGGCCTCAAAGGGCTTCTCGATTATTACGTCAACTTTTT
CAAAGGCATGTTTGAATTTGATAAAAGAGAATTTATCTCAGCGATTACGTATTATAAACAAGCTGAGAAAAAACTGGCCT
TCGTATCGGACCACGTGGAACGGGCGGAGTTTTATTTTAAAGTGGCCGAAGCTTATTATCATATGAAACAAACGTATTTT
TCTTTGATACATATAAAAAACGCTTATGAAATTTACGTAGAGCAGGACACATATAACGTCCGGATCATTCAATGCCATTT
TGTATTCGGCGTCAATTTAATGGATGAAAGGCGCTTTGAACAGGCGGCCAAACATTTTCAGCACGCTCTGCAAATGGCCG
AAAAAGAACAAAAAGCGCAGCTTGTCGGGAGGGCGCTGTATAACCTCGGACTGTGCTACTACAATCAGGACCGCATCGGC
GAAGCGATTCCGTACTTTGAACGGGCGGTTGATACATTTGAATCACAAAGAATCGTCAATTCTCTTCCTCAAGCATATTT
TCTAATCACACTCATTTACTTTAAACTCGGAAAAAAAGAAAAAGCGTCGGAATATCACAAGCGGGGATATGAATATGCTA
AAGAAACAGACGATCCCGTTTACACGGTAAAATTCGAATGGCTGCAGGCTCTGTATCAGGCGAAACCGGACGAGGAAAAA
ATCAGCGCATGTTTCCGTTACCTGGAAGATAAAAATTTATACGCCGATATAGAGGATTTAGCACTAGAAGCAGCTAAATA
TTACTATGAACAAAATTGCTTTAAGATTTCTTCTGACTATTTTCTGAAAGTCGAAGAGGCAAGGAAACAAATACAAAGGA
GTGAGGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (6-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	82.199	100	0.822
rapF	Bacillus subtilis subsp. subtilis str. 168	57.105	99.476	0.568