Detailed information NTG0960135

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACI3MW_RS15680
• Genome accession: NZ_CP173528
• Coordinates: 3044545..3045570 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 98210
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3039545..3050570

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACI3MW_RS15670 (ACI3MW_15660)	rpmE	3041776..3041988 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACI3MW_RS15675 (ACI3MW_15665)	priA	3042191..3044389 (+)	2199	WP_001590975.1	primosomal protein N'	Machinery gene
ACI3MW_RS15680 (ACI3MW_15670)	cytR	3044545..3045570 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACI3MW_RS15685 (ACI3MW_15675)	ftsN	3045662..3046621 (+)	960	WP_000068834.1	cell division protein FtsN	-
ACI3MW_RS15690 (ACI3MW_15680)	hslV	3046714..3047244 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACI3MW_RS15695 (ACI3MW_15685)	hslU	3047254..3048585 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ACI3MW_RS15700 (ACI3MW_15690)	menA	3048652..3049578 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACI3MW_RS15705 (ACI3MW_15695)	rraA	3049671..3050156 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACI3MW_RS15710 (ACI3MW_15700)	zapB	3050241..3050486 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=960135 ACI3MW_RS15680 WP_000644904.1 3044545..3045570(+) (cytR) [Escherichia coli strain 98210]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=960135 ACI3MW_RS15680 WP_000644904.1 3044545..3045570(+) (cytR) [Escherichia coli strain 98210]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628