Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   WHL52_RS07850 Genome accession   NZ_CP149576
Coordinates   1493384..1493959 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain DSM 10     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1488384..1498959
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHL52_RS07820 dapD 1488570..1489280 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  WHL52_RS07825 dapI 1489350..1490474 (+) 1125 WP_003232383.1 N-acetyldiaminopimelate deacetylase -
  WHL52_RS07830 ykuS 1490536..1490781 (+) 246 WP_003232382.1 YkuS family protein -
  WHL52_RS07835 mscT 1490818..1491621 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  WHL52_RS07840 ahpA 1491858..1492400 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  WHL52_RS07845 ykuV 1492472..1492918 (+) 447 WP_003245810.1 thiol-disulfide oxidoreductase YkuV -
  WHL52_RS07850 rok 1493384..1493959 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  WHL52_RS07855 cse15 1494000..1494965 (-) 966 WP_003245018.1 spore protein Cse15 -
  WHL52_RS07860 mobA 1495102..1495701 (+) 600 WP_003232376.1 molybdenum cofactor guanylyltransferase -
  WHL52_RS07865 moeB 1495752..1496771 (+) 1020 WP_003232375.1 molybdopterin-synthase adenylyltransferase MoeB -
  WHL52_RS07870 glp 1496789..1498081 (+) 1293 WP_003232372.1 gephyrin-like molybdotransferase Glp -
  WHL52_RS07875 mobB 1498042..1498563 (+) 522 WP_003232370.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=959961 WHL52_RS07850 WP_003232378.1 1493384..1493959(+) (rok) [Bacillus subtilis strain DSM 10]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=959961 WHL52_RS07850 WP_003232378.1 1493384..1493959(+) (rok) [Bacillus subtilis strain DSM 10]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1