Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   WHL52_RS07735 Genome accession   NZ_CP149576
Coordinates   1474157..1474621 (-) Length   154 a.a.
NCBI ID   WP_003232406.1    Uniprot ID   G4NVM0
Organism   Bacillus subtilis strain DSM 10     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1469157..1479621
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHL52_RS07715 kinA 1469623..1471443 (+) 1821 WP_003245779.1 sporulation histidine kinase KinA -
  WHL52_RS07720 dapX 1471454..1472635 (-) 1182 WP_003232415.1 aminotransferase A -
  WHL52_RS07725 - 1472837..1472998 (-) 162 WP_003245246.1 hypothetical protein -
  WHL52_RS07730 cheV 1473202..1474113 (+) 912 WP_009967126.1 chemotaxis protein CheV -
  WHL52_RS07735 kre 1474157..1474621 (-) 465 WP_003232406.1 YkyB family protein Regulator
  WHL52_RS07740 ykuC 1474747..1476039 (-) 1293 WP_003245267.1 MFS transporter -
  WHL52_RS07745 ltdD 1476115..1476609 (-) 495 WP_010886500.1 L,D-transpeptidase family protein -
  WHL52_RS07750 ppeE 1476666..1477526 (-) 861 WP_003232400.1 metallophosphoesterase -
  WHL52_RS07755 fadH 1477669..1478433 (+) 765 WP_003232398.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17895.71 Da        Isoelectric Point: 10.3545

>NTDB_id=959960 WHL52_RS07735 WP_003232406.1 1474157..1474621(-) (kre) [Bacillus subtilis strain DSM 10]
MDDHAYTKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=959960 WHL52_RS07735 WP_003232406.1 1474157..1474621(-) (kre) [Bacillus subtilis strain DSM 10]
ATGGACGACCATGCATATACGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTATCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NVM0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

100

100

1