Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   WHL52_RS04720 Genome accession   NZ_CP149576
Coordinates   925228..926022 (+) Length   264 a.a.
NCBI ID   WP_003243354.1    Uniprot ID   A0AAE2SGN5
Organism   Bacillus subtilis strain DSM 10     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 920228..931022
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WHL52_RS04690 sxzA 921067..922098 (+) 1032 WP_003243057.1 iron ABC transporter permease -
  WHL52_RS04695 yfhB 922213..923094 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  WHL52_RS04700 yfhC 923182..923766 (+) 585 WP_003243940.1 nitroreductase -
  WHL52_RS04705 yfhD 923805..923996 (-) 192 WP_003233561.1 YfhD family protein -
  WHL52_RS04710 yfhE 924063..924173 (-) 111 WP_003223230.1 YfhE family protein -
  WHL52_RS04715 yfhF 924228..925139 (-) 912 WP_003244332.1 TIGR01777 family oxidoreductase -
  WHL52_RS04720 recX 925228..926022 (+) 795 WP_003243354.1 recombination regulator RecX Regulator
  WHL52_RS04725 yfhH 926024..926338 (+) 315 WP_003244592.1 YfhH family protein -
  WHL52_RS04730 yfhI 926481..927674 (+) 1194 WP_003243500.1 MFS transporter -
  WHL52_RS04735 sspK 927707..927859 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  WHL52_RS04740 yfhJ 927984..928253 (+) 270 WP_003243789.1 YfhJ family protein -
  WHL52_RS04745 yfhK 928398..928916 (+) 519 WP_003243363.1 SH3 domain-containing protein -
  WHL52_RS04750 spdL 929001..929333 (+) 333 WP_003242803.1 SdpC immunity protein SpdL -
  WHL52_RS04755 ephM 929320..930180 (+) 861 WP_003243419.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31013.23 Da        Isoelectric Point: 6.6686

>NTDB_id=959943 WHL52_RS04720 WP_003243354.1 925228..926022(+) (recX) [Bacillus subtilis strain DSM 10]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=959943 WHL52_RS04720 WP_003243354.1 925228..926022(+) (recX) [Bacillus subtilis strain DSM 10]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGATCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

100

100

1