Detailed information NTG0959901

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACI3MG_RS15635
• Genome accession: NZ_CP173493
• Coordinates: 3183254..3184279 (-)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 98218
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 3178254..3189279

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACI3MG_RS15605 (ACI3MG_15620)	zapB	3178338..3178583 (+)	246	WP_001296623.1	septal ring assembly protein ZapB	-
ACI3MG_RS15610 (ACI3MG_15625)	rraA	3178668..3179153 (-)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACI3MG_RS15615 (ACI3MG_15630)	menA	3179246..3180172 (-)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACI3MG_RS15620 (ACI3MG_15635)	hslU	3180239..3181570 (-)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ACI3MG_RS15625 (ACI3MG_15640)	hslV	3181580..3182110 (-)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACI3MG_RS15630 (ACI3MG_15645)	ftsN	3182203..3183162 (-)	960	WP_000068834.1	cell division protein FtsN	-
ACI3MG_RS15635 (ACI3MG_15650)	cytR	3183254..3184279 (-)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACI3MG_RS15640 (ACI3MG_15655)	priA	3184435..3186633 (-)	2199	WP_022646377.1	primosomal protein N'	Machinery gene
ACI3MG_RS15645 (ACI3MG_15660)	rpmE	3186836..3187048 (+)	213	WP_000710769.1	50S ribosomal protein L31	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=959901 ACI3MG_RS15635 WP_000644904.1 3183254..3184279(-) (cytR) [Escherichia coli strain 98218]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=959901 ACI3MG_RS15635 WP_000644904.1 3183254..3184279(-) (cytR) [Escherichia coli strain 98218]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACCGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGTGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628