Detailed information    

insolico Bioinformatically predicted

Overview


Name   kpsS   Type   Regulator
Locus tag   WJ044_RS07455 Genome accession   NZ_CP149499
Coordinates   1460886..1462070 (-) Length   394 a.a.
NCBI ID   WP_002882476.1    Uniprot ID   -
Organism   Campylobacter jejuni strain CIP 702     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 1455886..1467070
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WJ044_RS07430 (WJ044_07435) fliL 1457035..1457570 (+) 536 Protein_1443 flagellar basal body-associated protein FliL -
  WJ044_RS07435 (WJ044_07440) acpS 1457570..1457917 (+) 348 WP_002780441.1 holo-ACP synthase -
  WJ044_RS07440 (WJ044_07445) - 1457918..1458337 (-) 420 WP_002780440.1 hypothetical protein -
  WJ044_RS07445 (WJ044_07450) - 1458334..1459695 (-) 1362 WP_002780438.1 cytochrome P450 -
  WJ044_RS07450 (WJ044_07455) - 1459692..1460813 (-) 1122 WP_002780436.1 hypothetical protein -
  WJ044_RS07455 (WJ044_07460) kpsS 1460886..1462070 (-) 1185 WP_002882476.1 capsule polysaccharide modification protein KpsS Regulator
  WJ044_RS07460 (WJ044_07465) kpsC 1462099..1464165 (-) 2067 WP_002882475.1 capsular polysaccharide biosynthesis protein -
  WJ044_RS07465 (WJ044_07470) cysC 1464162..1464674 (-) 513 WP_002855668.1 cytidine diphosphoramidate kinase -
  WJ044_RS07470 (WJ044_07475) - 1464664..1465425 (-) 762 WP_002825812.1 CTP:phosphoglutamine cytidylyltransferase -
  WJ044_RS07475 (WJ044_07480) - 1465427..1466029 (-) 603 WP_002859688.1 gamma-glutamyl-CDP-amidate hydrolase -

Sequence


Protein


Download         Length: 394 a.a.        Molecular weight: 46833.57 Da        Isoelectric Point: 9.8987

>NTDB_id=959703 WJ044_RS07455 WP_002882476.1 1460886..1462070(-) (kpsS) [Campylobacter jejuni strain CIP 702]
MKISKKLQQEFTSKNVLLLQGPVGNFFHHLAIKMKKKQTKVFKLNFNGGDFFFYPSGTRCKCDEKDLENFYRDFFQSKKI
DAILMYNDCRIIHAKAIKVAKELGIEIWIFEEGYLRPYCITLEKDGVNANSSLPRDKNFYLSQNIFTKESIKEIPGGFKF
MAFDAFLYWLFAFILAPFFNNKLHHRTLYPFEFLFWFRSLYRKYLYKITEKKLNEKIYNLEKKYFLAILQVYSDTQIKYH
YKKSIEHFIEETILSFANHARAKSYLVFKHHPMDRGYKNYSKLINDLSQKYHVEGRVLYVHDTHLPVLLRKALGCITINS
TVGLSAILEGCPTKVCGNAFYDFEGLSYPKKLQFFWREAHAYKPNPVLVCNFKKYLLQTNQFNGNFYKNFFLDK

Nucleotide


Download         Length: 1185 bp        

>NTDB_id=959703 WJ044_RS07455 WP_002882476.1 1460886..1462070(-) (kpsS) [Campylobacter jejuni strain CIP 702]
ATGAAAATTTCTAAAAAATTGCAGCAAGAATTTACTAGTAAAAATGTTTTACTCTTGCAAGGGCCTGTGGGAAATTTTTT
TCATCATCTTGCAATAAAAATGAAAAAAAAACAAACCAAAGTTTTTAAACTCAATTTTAACGGTGGAGATTTTTTTTTCT
ATCCTAGTGGAACGAGGTGTAAGTGCGATGAAAAAGATCTTGAAAATTTCTATAGAGATTTTTTTCAAAGCAAAAAAATC
GATGCTATTTTAATGTATAATGATTGTCGTATTATCCATGCTAAGGCTATTAAAGTGGCTAAAGAATTAGGAATTGAAAT
ATGGATTTTTGAAGAAGGATATTTAAGGCCTTATTGTATTACTTTGGAAAAAGATGGGGTGAATGCAAATTCTTCTTTAC
CGCGTGATAAAAATTTTTATCTTTCTCAAAATATTTTTACCAAAGAAAGCATAAAAGAAATTCCAGGTGGATTTAAATTT
ATGGCTTTTGATGCTTTTTTGTATTGGTTGTTTGCTTTTATTTTGGCTCCATTTTTTAACAACAAACTTCATCATCGCAC
TTTATATCCTTTTGAATTTTTATTTTGGTTTAGATCATTGTATAGAAAGTATCTTTATAAGATTACAGAAAAAAAACTAA
ATGAAAAGATTTATAATTTAGAAAAAAAGTACTTTTTGGCGATTTTACAAGTTTATAGCGATACGCAAATTAAATATCAT
TACAAAAAAAGCATAGAGCACTTTATAGAGGAAACCATACTTTCTTTTGCAAACCATGCAAGAGCTAAATCTTATCTAGT
TTTTAAACACCATCCCATGGATAGGGGCTATAAGAATTATTCTAAACTCATAAATGATTTAAGTCAAAAATATCATGTAG
AAGGAAGGGTTTTATATGTTCATGATACCCACTTGCCAGTTCTTTTAAGAAAGGCTTTGGGTTGTATTACTATAAATTCA
ACAGTAGGCCTTAGTGCTATTTTAGAAGGCTGTCCGACTAAGGTTTGTGGCAATGCTTTTTATGATTTTGAAGGCTTATC
TTATCCAAAAAAACTTCAATTTTTTTGGCGTGAAGCTCATGCTTATAAACCCAATCCTGTTTTGGTATGTAATTTTAAAA
AATATCTTTTACAAACTAATCAATTCAACGGCAATTTTTATAAAAATTTCTTTTTAGACAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kpsS Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819

96.193

100

0.962