Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   AABA19_RS05675 Genome accession   NZ_AP028609
Coordinates   1126461..1126925 (-) Length   154 a.a.
NCBI ID   WP_001135782.1    Uniprot ID   P59659
Organism   Streptococcus pneumoniae strain Sep4     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1121461..1131925
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AABA19_RS05655 (TKY121806_11120) - 1122412..1123380 (-) 969 WP_000105362.1 thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha -
  AABA19_RS05660 (TKY121806_11130) pdrM 1123534..1124895 (-) 1362 WP_000278537.1 sodium-coupled multidrug efflux MATE transporter PdrM -
  AABA19_RS05665 (TKY121806_11140) - 1124906..1125166 (-) 261 WP_001105925.1 hypothetical protein -
  AABA19_RS05670 (TKY121806_11150) - 1125180..1126448 (-) 1269 WP_000924481.1 dihydroorotase -
  AABA19_RS05675 (TKY121806_11160) mutX 1126461..1126925 (-) 465 WP_001135782.1 NUDIX hydrolase Machinery gene
  AABA19_RS05680 (TKY121806_11170) - 1126935..1127588 (-) 654 WP_000401328.1 uracil-DNA glycosylase -
  AABA19_RS05685 (TKY121806_11180) - 1127726..1128328 (-) 603 WP_001812270.1 hypothetical protein -
  AABA19_RS05690 (TKY121806_11190) - 1128386..1129099 (-) 714 WP_000499429.1 YjjG family noncanonical pyrimidine nucleotidase -
  AABA19_RS05695 (TKY121806_11200) dhaM 1129557..1129931 (-) 375 WP_061753555.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17870.30 Da        Isoelectric Point: 4.2287

>NTDB_id=95958 AABA19_RS05675 WP_001135782.1 1126461..1126925(-) (mutX) [Streptococcus pneumoniae strain Sep4]
MPQLATICYIDNGKELLMLHRNKKPNDVHEGKWIGVGGKLERGETPQECAVREILEETGLKAKPVLKGVITFPEFTPDLD
WYTYVFKVTEFEGDLIDCNEGMLEWVPYDEVLSKPTWEGDHTFVEWLLEDKPFFSAKFVYDGDKLLDTQVDFYE

Nucleotide


Download         Length: 465 bp        

>NTDB_id=95958 AABA19_RS05675 WP_001135782.1 1126461..1126925(-) (mutX) [Streptococcus pneumoniae strain Sep4]
ATGCCTCAGTTAGCGACGATTTGTTACATTGATAATGGGAAAGAACTGCTCATGCTCCATCGTAATAAGAAACCCAATGA
TGTCCATGAAGGGAAATGGATTGGTGTGGGTGGTAAGCTAGAGAGAGGAGAGACGCCCCAGGAATGCGCGGTACGTGAAA
TCCTTGAAGAAACAGGGCTCAAAGCCAAGCCAGTTCTAAAAGGTGTCATCACTTTTCCTGAATTTACACCAGATTTAGAC
TGGTACACCTATGTTTTTAAGGTGACGGAGTTTGAGGGCGACTTGATTGACTGCAATGAGGGGATGCTAGAATGGGTTCC
CTATGATGAGGTTTTGAGCAAGCCGACCTGGGAAGGTGACCACACCTTTGTTGAGTGGCTTTTAGAGGATAAACCCTTCT
TTTCAGCCAAGTTTGTTTATGATGGGGATAAATTGTTGGATACCCAAGTTGATTTCTATGAATAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(2-127)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P59659

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

100

100

1

Multiple sequence alignment