Detailed information NTG0959463

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACI3M7_RS11770
• Genome accession: NZ_CP173472
• Coordinates: 2263035..2264060 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 98224
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2258035..2269060

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACI3M7_RS11760 (ACI3M7_11755)	rpmE	2260266..2260478 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACI3M7_RS11765 (ACI3M7_11760)	priA	2260681..2262879 (+)	2199	WP_001590975.1	primosomal protein N'	Machinery gene
ACI3M7_RS11770 (ACI3M7_11765)	cytR	2263035..2264060 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
ACI3M7_RS11775 (ACI3M7_11770)	ftsN	2264152..2265111 (+)	960	WP_000068834.1	cell division protein FtsN	-
ACI3M7_RS11780 (ACI3M7_11775)	hslV	2265204..2265734 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACI3M7_RS11785 (ACI3M7_11780)	hslU	2265744..2267075 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ACI3M7_RS11790 (ACI3M7_11785)	menA	2267142..2268068 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACI3M7_RS11795 (ACI3M7_11790)	rraA	2268161..2268646 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACI3M7_RS11800 (ACI3M7_11795)	zapB	2268731..2268976 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=959463 ACI3M7_RS11770 WP_000644904.1 2263035..2264060(+) (cytR) [Escherichia coli strain 98224]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=959463 ACI3M7_RS11770 WP_000644904.1 2263035..2264060(+) (cytR) [Escherichia coli strain 98224]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628