Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   WJ062_RS08260 Genome accession   NZ_CP149486
Coordinates   1710367..1711080 (+) Length   237 a.a.
NCBI ID   WP_002992823.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain EMM113     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1705367..1716080
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WJ062_RS08250 (WJ062_08225) treC 1706437..1708065 (-) 1629 WP_136021523.1 alpha,alpha-phosphotrehalase -
  WJ062_RS08255 (WJ062_08230) treP 1708132..1710156 (-) 2025 WP_136021522.1 PTS system trehalose-specific EIIBC component -
  WJ062_RS08260 (WJ062_08235) treR 1710367..1711080 (+) 714 WP_002992823.1 trehalose operon repressor Regulator
  WJ062_RS08265 (WJ062_08240) - 1711359..1711697 (-) 339 Protein_1566 winged helix-turn-helix transcriptional regulator -
  WJ062_RS08270 (WJ062_08245) - 1711883..1712740 (+) 858 WP_023605347.1 VOC family protein -
  WJ062_RS08275 (WJ062_08250) yaaA 1712782..1713513 (+) 732 WP_002982222.1 peroxide stress protein YaaA -
  WJ062_RS08280 (WJ062_08255) nrdG 1713687..1714301 (-) 615 WP_002982219.1 anaerobic ribonucleoside-triphosphate reductase activating protein -
  WJ062_RS08285 (WJ062_08260) - 1714301..1714810 (-) 510 WP_032464619.1 GNAT family N-acetyltransferase -
  WJ062_RS08290 (WJ062_08265) - 1714819..1715754 (-) 936 WP_136021521.1 Gfo/Idh/MocA family protein -
  WJ062_RS08295 (WJ062_08270) - 1715783..1715929 (-) 147 WP_002982210.1 hypothetical protein -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27620.79 Da        Isoelectric Point: 9.6307

>NTDB_id=959453 WJ062_RS08260 WP_002992823.1 1710367..1711080(+) (treR) [Streptococcus pyogenes strain EMM113]
MTKYERIYKDLETKINKDFYKEGDFLPTEIELSQQYQASRDTVRKALSLLTKAGLILKKQGRGTQVIRHHQIMFPISELT
SYQELVSYSNLDSKTNVIAIDKLIVDETLSKLTGFSKNSLVWRVTRQRVVEGVASVLDIDYLSKTLVPIMTREIAEHSIY
QYLEKELHLAIDFALKEVTIDQITDRDKILLDLGSDQHVVSVKSKVYLSNNNQFQFTESRHKLEKFKFLDFARRRPK

Nucleotide


Download         Length: 714 bp        

>NTDB_id=959453 WJ062_RS08260 WP_002992823.1 1710367..1711080(+) (treR) [Streptococcus pyogenes strain EMM113]
ATGACAAAGTATGAACGTATTTATAAAGACCTCGAAACAAAAATAAACAAAGACTTTTACAAAGAAGGGGATTTTTTACC
TACTGAAATAGAATTGAGTCAACAATACCAAGCTAGCCGAGATACCGTCCGCAAGGCTCTCTCGCTTCTCACAAAGGCAG
GTCTTATCCTCAAAAAACAAGGACGTGGCACCCAAGTGATTAGACATCATCAGATCATGTTCCCTATCTCAGAACTAACT
AGTTATCAGGAACTCGTCTCTTACTCAAATCTAGATTCTAAGACCAACGTCATTGCCATTGATAAACTGATTGTGGATGA
GACACTTTCAAAATTGACCGGTTTTAGCAAAAACAGCTTGGTCTGGCGTGTTACGCGCCAACGCGTTGTTGAGGGTGTGG
CTTCCGTCTTAGACATTGATTACCTTAGTAAAACTTTGGTGCCAATAATGACAAGGGAAATCGCAGAGCATTCTATTTAT
CAATATTTGGAAAAGGAACTCCATCTCGCCATTGACTTTGCCCTCAAAGAGGTTACCATTGACCAAATAACCGATCGTGA
TAAAATTTTACTTGACCTTGGATCAGACCAACATGTTGTTTCCGTCAAATCCAAAGTCTACCTTTCCAATAATAACCAAT
TCCAATTCACCGAGAGTCGCCATAAACTGGAAAAATTTAAATTTTTAGATTTTGCTCGGCGCAGACCAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(91-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

68.376

98.734

0.675