Detailed information NTG0959397

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: WJ054_RS09405
• Genome accession: NZ_CP149485
• Coordinates: 1902643..1903575 (-)
• Length: 310 a.a.
• NCBI ID: WP_003060110.1
• Uniprot ID: A0A9X8T5Q4
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain STG643
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1897643..1908575

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WJ054_RS09380 (WJ054_09365)	tsaD	1898133..1899149 (-)	1017	WP_084916686.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
WJ054_RS09385 (WJ054_09370)	rimI	1899139..1899564 (-)	426	WP_003056684.1	ribosomal protein S18-alanine N-acetyltransferase	-
WJ054_RS09390 (WJ054_09375)	tsaB	1899566..1900264 (-)	699	WP_065358518.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
WJ054_RS09395 (WJ054_09380)	-	1900550..1900780 (+)	231	WP_003056704.1	DNA-dependent RNA polymerase subunit epsilon	-
WJ054_RS09400 (WJ054_09385)	rnjA	1900782..1902464 (+)	1683	WP_003056700.1	ribonuclease J1	-
WJ054_RS09405 (WJ054_09390)	amiF	1902643..1903575 (-)	933	WP_003060110.1	ABC transporter ATP-binding protein	Regulator
WJ054_RS09410 (WJ054_09395)	oppD	1903568..1904620 (-)	1053	WP_012767556.1	ABC transporter ATP-binding protein	Regulator
WJ054_RS09415 (WJ054_09400)	-	1904632..1905663 (-)	1032	WP_065957283.1	ABC transporter permease	-
WJ054_RS09420 (WJ054_09405)	-	1905673..1906587 (-)	915	WP_003052794.1	ABC transporter permease	-
WJ054_RS09425 (WJ054_09410)	-	1906855..1908510 (-)	1656	WP_003058031.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 310 a.a.
• Molecular weight: 35203.02 Da
• Isoelectric Point: 6.6437

>NTDB_id=959397 WJ054_RS09405 WP_003060110.1 1902643..1903575(-) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain STG643]
MNDNRKKLVELKNVSLTFNKGKKNEVKAIDNVSFDIYEGEVFGLVGESGSGKTTVGRAILKLYDINEGEIIFNGETVSHL
KGKDLRTFRKDAQMIFQDPQASLNGRMKIRDIVAEGLDIHGLTASKAEREERVQELLDLVGLNKDHLTRYPHEFSGGQRQ
RIGIARALAVKPKFIIADEPISALDVSIQAQVVNLMQKLQHKRGLTYLFIAHDLSMVKYISDRIGVMHWGKMLEIGTSDD
VYNHPIHPYTKSLLSAIPEPDPDKERQRVADVYDPSQELDGQERQMHEITPGHFVLATQEEADQYRREYH

Nucleotide

• Length: 933 bp

>NTDB_id=959397 WJ054_RS09405 WP_003060110.1 1902643..1903575(-) (amiF) [Streptococcus dysgalactiae subsp. equisimilis strain STG643]
ATGAATGATAATCGAAAGAAATTAGTAGAGTTAAAAAATGTCTCCTTAACTTTCAATAAGGGAAAGAAAAACGAAGTCAA
AGCCATTGATAATGTGAGCTTTGATATTTATGAAGGGGAAGTGTTTGGACTGGTTGGGGAATCCGGATCAGGAAAAACAA
CTGTTGGTCGCGCCATTTTAAAGCTTTATGATATTAATGAAGGGGAAATTATTTTTAATGGTGAAACCGTTTCTCATTTG
AAAGGGAAAGACTTGCGGACCTTTCGTAAGGATGCTCAGATGATTTTCCAAGATCCTCAGGCTAGTCTTAACGGCCGTAT
GAAAATCAGAGATATTGTGGCAGAAGGGCTAGATATTCATGGACTCACAGCTTCAAAGGCAGAACGAGAAGAACGCGTGC
AAGAACTCCTTGATTTGGTTGGGTTGAACAAGGACCATTTGACACGTTACCCCCATGAATTTTCTGGTGGTCAACGTCAA
CGGATTGGGATTGCCCGTGCTTTGGCAGTTAAACCTAAATTTATCATTGCTGATGAACCTATCTCAGCTCTCGATGTGTC
GATTCAGGCCCAGGTAGTTAACTTGATGCAAAAGCTTCAGCACAAACGTGGATTGACCTATCTTTTTATTGCCCATGACT
TGTCAATGGTCAAATACATTTCTGACCGTATCGGAGTCATGCACTGGGGTAAAATGTTGGAGATTGGGACCTCAGATGAT
GTCTATAATCATCCTATTCATCCTTATACCAAGAGCCTACTCTCGGCTATTCCTGAACCAGATCCAGACAAAGAACGTCA
GCGGGTGGCTGATGTATATGATCCAAGTCAAGAATTGGACGGCCAAGAACGTCAGATGCATGAGATTACGCCAGGCCATT
TTGTCTTAGCTACCCAAGAAGAAGCAGACCAATATCGACGGGAGTATCATTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-268)

• ABC transporter (ABC_tran) (30-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMD-9	54.098	98.387	0.532
amiF	Streptococcus thermophilus LMG 18311	53.77	98.387	0.529
amiF	Streptococcus salivarius strain HSISS4	53.443	98.387	0.526