Detailed information NTG0959398

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: WJ054_RS09410
• Genome accession: NZ_CP149485
• Coordinates: 1903568..1904620 (-)
• Length: 350 a.a.
• NCBI ID: WP_012767556.1
• Uniprot ID: A0A9X8T4H4
• Organism: Streptococcus dysgalactiae subsp. equisimilis strain STG643
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1898568..1909620

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WJ054_RS09385 (WJ054_09370)	rimI	1899139..1899564 (-)	426	WP_003056684.1	ribosomal protein S18-alanine N-acetyltransferase	-
WJ054_RS09390 (WJ054_09375)	tsaB	1899566..1900264 (-)	699	WP_065358518.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
WJ054_RS09395 (WJ054_09380)	-	1900550..1900780 (+)	231	WP_003056704.1	DNA-dependent RNA polymerase subunit epsilon	-
WJ054_RS09400 (WJ054_09385)	rnjA	1900782..1902464 (+)	1683	WP_003056700.1	ribonuclease J1	-
WJ054_RS09405 (WJ054_09390)	amiF	1902643..1903575 (-)	933	WP_003060110.1	ABC transporter ATP-binding protein	Regulator
WJ054_RS09410 (WJ054_09395)	oppD	1903568..1904620 (-)	1053	WP_012767556.1	ABC transporter ATP-binding protein	Regulator
WJ054_RS09415 (WJ054_09400)	-	1904632..1905663 (-)	1032	WP_065957283.1	ABC transporter permease	-
WJ054_RS09420 (WJ054_09405)	-	1905673..1906587 (-)	915	WP_003052794.1	ABC transporter permease	-
WJ054_RS09425 (WJ054_09410)	-	1906855..1908510 (-)	1656	WP_003058031.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 350 a.a.
• Molecular weight: 38667.36 Da
• Isoelectric Point: 5.8490

>NTDB_id=959398 WJ054_RS09410 WP_012767556.1 1903568..1904620(-) (oppD) [Streptococcus dysgalactiae subsp. equisimilis strain STG643]
MTNETILSVKNLHVDFKTYAGDVKAIRDISFDLKKGETLAIVGESGSGKSVTTRTLMGLNAKNANLSGEIDFKGKKLNAL
KEEEWVKVRGKEIAMIFQDPMTSLDPTMKIGMQIAEAILIHENISKQKALSRALELMHQVGIPNAEEHINDYPHQWSGGM
RQRAVIAIALAANPEILIADEPTTALDVTIQAQILKLMKEIQQQTESSIIFITHDLGVVAGMADRVAVMYAGKIVEYGTV
DEVFYNPQHPYTWGLLNSMPTTDTASGSLESIPGTPPDLLNPPKGDAFAARNEFALDIDHVEAPPMFKVSDTHYAATWLL
DERAPKVTPPVQIQKRWAKWQKREGGKLNE

Nucleotide

• Length: 1053 bp

>NTDB_id=959398 WJ054_RS09410 WP_012767556.1 1903568..1904620(-) (oppD) [Streptococcus dysgalactiae subsp. equisimilis strain STG643]
ATGACAAACGAAACCATTTTAAGTGTTAAAAACCTCCACGTTGATTTCAAAACCTATGCAGGGGATGTGAAAGCTATTCG
CGATATTAGTTTTGACCTCAAAAAAGGAGAAACGCTTGCGATTGTTGGGGAATCTGGATCAGGAAAATCAGTGACCACTA
GGACCTTGATGGGCTTAAATGCTAAAAATGCTAACCTTTCTGGGGAAATTGATTTTAAAGGAAAAAAACTCAATGCCCTT
AAGGAAGAAGAATGGGTTAAGGTACGTGGTAAAGAAATTGCCATGATTTTCCAAGACCCAATGACCAGTCTCGATCCAAC
GATGAAAATCGGAATGCAAATTGCTGAAGCTATTTTGATTCATGAGAATATCAGTAAGCAAAAAGCCTTGAGTCGTGCTC
TTGAATTGATGCATCAAGTAGGTATTCCAAATGCTGAAGAGCATATTAATGATTATCCACATCAGTGGTCAGGTGGGATG
CGTCAGCGTGCTGTGATTGCTATCGCTCTCGCAGCTAATCCAGAAATCCTGATTGCTGATGAACCGACCACAGCACTTGA
TGTTACCATTCAGGCACAAATCTTGAAATTAATGAAAGAAATCCAACAACAGACGGAATCATCTATTATTTTCATTACCC
ATGACCTTGGAGTTGTGGCTGGTATGGCTGACCGTGTCGCGGTAATGTATGCTGGAAAAATTGTTGAGTATGGAACGGTG
GATGAAGTCTTTTATAACCCGCAACACCCTTATACATGGGGCTTGCTTAATTCTATGCCAACCACAGATACCGCCTCAGG
GAGTTTAGAATCTATTCCAGGAACGCCGCCTGACTTGCTTAATCCTCCTAAGGGAGATGCTTTTGCAGCCCGCAATGAAT
TTGCCTTGGATATTGATCATGTGGAGGCTCCGCCGATGTTTAAGGTCAGCGACACCCATTATGCGGCAACTTGGTTATTA
GATGAGCGAGCGCCCAAAGTCACTCCGCCAGTTCAAATTCAAAAACGATGGGCAAAATGGCAAAAACGAGAAGGAGGCAA
GCTAAATGAATGA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

• ABC transporter (ABC_tran) (27-183)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	79.429	100	0.794
amiE	Streptococcus salivarius strain HSISS4	55.394	98	0.543
amiE	Streptococcus thermophilus LMG 18311	56.325	94.857	0.534
amiE	Streptococcus thermophilus LMD-9	56.325	94.857	0.534