Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   WJ054_RS08650 Genome accession   NZ_CP149485
Coordinates   1746132..1746857 (-) Length   241 a.a.
NCBI ID   WP_003057032.1    Uniprot ID   A0A9X5LWD8
Organism   Streptococcus dysgalactiae subsp. equisimilis strain STG643     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1741132..1751857
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  WJ054_RS08620 (WJ054_08600) nusA 1741327..1742484 (-) 1158 WP_003057051.1 transcription termination factor NusA -
  WJ054_RS08625 (WJ054_08605) rimP 1742627..1743109 (-) 483 WP_155778083.1 ribosome maturation factor RimP -
  WJ054_RS08635 (WJ054_08615) trmB 1743604..1744239 (-) 636 WP_003052470.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  WJ054_RS08640 (WJ054_08620) ccrZ 1744239..1745030 (-) 792 WP_003052472.1 cell cycle regulator CcrZ -
  WJ054_RS08645 (WJ054_08625) - 1745095..1746129 (-) 1035 WP_015017341.1 ABC transporter permease -
  WJ054_RS08650 (WJ054_08630) pptA 1746132..1746857 (-) 726 WP_003057032.1 ABC transporter ATP-binding protein Regulator
  WJ054_RS08655 (WJ054_08635) - 1746929..1747348 (+) 420 WP_012767493.1 HIT family protein -
  WJ054_RS08660 (WJ054_08640) - 1747345..1747674 (+) 330 WP_003057072.1 hypothetical protein -
  WJ054_RS08665 (WJ054_08645) brpA 1747832..1749100 (-) 1269 WP_015058007.1 biofilm formation/cell division transcriptional regulator BrpA -
  WJ054_RS08670 (WJ054_08650) - 1749112..1749633 (-) 522 WP_003057063.1 GNAT family N-acetyltransferase -
  WJ054_RS08675 (WJ054_08655) tsaE 1749626..1750069 (-) 444 WP_115283587.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  WJ054_RS08680 (WJ054_08660) - 1750246..1751706 (-) 1461 WP_115283480.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26416.65 Da        Isoelectric Point: 4.6450

>NTDB_id=959393 WJ054_RS08650 WP_003057032.1 1746132..1746857(-) (pptA) [Streptococcus dysgalactiae subsp. equisimilis strain STG643]
MLNIENLTGGYLNIPVLKEVSFSVGNGELVGLIGLNGAGKSTTINEIIGFLKPYQGEISIDGLTLTADPAAYRKKIGFIP
ETPSLYEELTLAEHINTVAMAYDIDVELAQKRAEPFLKMFRLADKLDWFPVHFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLELEKGKGKSILMSTHVLDSAEKMCDRFVILHHGQVRAQGTLADLQDAFGDASASLNDIYLALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=959393 WJ054_RS08650 WP_003057032.1 1746132..1746857(-) (pptA) [Streptococcus dysgalactiae subsp. equisimilis strain STG643]
ATGTTAAACATTGAAAATCTAACGGGGGGTTACCTCAATATTCCCGTTTTAAAAGAGGTCTCATTTTCTGTTGGCAATGG
TGAATTAGTTGGGTTGATAGGCTTAAATGGAGCTGGAAAATCAACAACTATCAATGAAATTATTGGTTTTTTAAAACCTT
ATCAGGGAGAAATTTCGATTGATGGACTAACCTTGACTGCAGATCCAGCTGCCTATCGTAAGAAAATTGGATTTATCCCA
GAGACACCTAGCCTCTATGAAGAATTAACTTTGGCAGAGCATATTAATACTGTGGCTATGGCCTATGATATTGATGTGGA
ATTGGCACAAAAACGAGCAGAACCGTTTTTAAAGATGTTCCGCTTAGCTGATAAATTAGATTGGTTTCCTGTTCATTTTT
CAAAAGGCATGAAGCAAAAAGTCATGATTATCTGTGCTTTTGTGATTGATCCAAGTCTGTTTATCCTTGACGAGCCATTT
TTAGGATTAGACCCGTTGGCTATCTCAGACTTGATTCAGACTTTGGAGCTTGAAAAAGGCAAAGGCAAATCGATTTTAAT
GAGTACTCATGTGCTTGACTCTGCTGAGAAAATGTGTGATCGTTTTGTCATTCTGCATCATGGTCAAGTACGGGCTCAGG
GAACGCTTGCTGACTTGCAGGATGCCTTCGGTGATGCTTCTGCTAGCCTTAACGATATTTACCTGGCATTGACAAAAGAG
GGCTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

75.314

99.17

0.747
  pptA Streptococcus thermophilus LMD-9

74.477

99.17

0.739