Detailed information NTG0959092

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: WDR05_RS02145
• Genome accession: NZ_CP149444
• Coordinates: 426962..428110 (+)
• Length: 382 a.a.
• NCBI ID: WP_003246686.1
• Uniprot ID: A0AAE2V9H5
• Organism: Bacillus subtilis strain HC-9
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 421962..433110

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WDR05_RS02125 (WDR05_02135)	yclH	422339..423019 (-)	681	WP_003234507.1	ABC transporter ATP-binding protein	-
WDR05_RS02130 (WDR05_02140)	yclI	423035..424495 (-)	1461	WP_406627080.1	ABC transporter permease	-
WDR05_RS02135 (WDR05_02145)	yclJ	424708..425391 (+)	684	WP_003246532.1	two-component system response regulator YclJ	-
WDR05_RS02140 (WDR05_02150)	yclK	425378..426799 (+)	1422	WP_113713032.1	two-component system sensor histidine kinase YclK	-
WDR05_RS02145 (WDR05_02155)	rapC	426962..428110 (+)	1149	WP_003246686.1	response regulator aspartate phosphatase RapC	Regulator
WDR05_RS02150 (WDR05_02160)	phrC	428094..428216 (+)	123	WP_003224994.1	phosphatase RapC inhibitor PhrC	Regulator
WDR05_RS02155 (WDR05_02165)	yczM	428316..428405 (-)	90	WP_015482794.1	YjcZ family sporulation protein	-
WDR05_RS02160 (WDR05_02170)	yczN	428487..428600 (-)	114	WP_003234495.1	YjcZ family sporulation protein	-
WDR05_RS02165 (WDR05_02175)	thrD	428754..430118 (-)	1365	WP_113713033.1	aspartate kinase	-
WDR05_RS02170 (WDR05_02180)	ceuB	430503..431453 (+)	951	WP_014475804.1	petrobactin ABC transporter permease YclN	Machinery gene
WDR05_RS02175 (WDR05_02185)	yclO	431446..432393 (+)	948	WP_003246705.1	petrobactin ABC transporter permease YclO	-

Sequence

Protein

• Length: 382 a.a.
• Molecular weight: 45634.68 Da
• Isoelectric Point: 4.9618

>NTDB_id=959092 WDR05_RS02145 WP_003246686.1 426962..428110(+) (rapC) [Bacillus subtilis strain HC-9]
MKSGVIPSSAVGQKINEWYRYIRTFSVPDAEVLKAEIQQELKHMQHDSNLLLYYSLMEFRHQLMLDYLEPLEKLNIEDQP
SLSELSRNIDSNQADLKGLLDYYVNFFRGMYEFDKREFISAITYYKQAEKKLSFVADHIERAEFYFKIAEAYYYMKQTYF
SLINIKNAYEIYVEQETYNVRIIQCHFVFGVNLMDERNFEQAARHFKLALNMAQAEQKAQLVGRAYYNLGLCYYNQDLLD
PAIDYFEKAVSTFESSRIVNSLPQAYFLITLIYYKQGKHDKASEYHKRGYEYAKETDDADYAVKFEFLQSLYLDQPNEEG
IERCFQYLKNKNMYADIEDLALEVAKYYYEQKWFKLSASYFLQVEEARKQIQRSEGLYEIEI

Nucleotide

• Length: 1149 bp

>NTDB_id=959092 WDR05_RS02145 WP_003246686.1 426962..428110(+) (rapC) [Bacillus subtilis strain HC-9]
ATGAAGAGCGGGGTAATTCCTTCTTCAGCGGTCGGTCAAAAAATTAACGAGTGGTACAGATATATCCGGACATTCAGCGT
GCCGGATGCCGAAGTGTTAAAAGCTGAAATCCAGCAGGAACTGAAACACATGCAGCATGATTCCAACTTGCTGCTTTATT
ATTCACTAATGGAATTCCGGCACCAGCTTATGCTGGATTATCTTGAGCCGTTAGAGAAATTAAATATCGAAGACCAGCCA
AGCCTGTCTGAATTATCAAGAAACATTGACAGCAATCAGGCAGATCTCAAAGGGCTGCTCGACTATTACGTGAATTTTTT
TCGCGGGATGTATGAATTTGATAAGCGGGAATTTATTTCTGCCATTACATACTATAAACAGGCGGAGAAAAAGCTCTCCT
TTGTCGCAGACCATATTGAACGGGCTGAATTTTATTTTAAAATCGCGGAAGCTTATTATTATATGAAGCAAACGTATTTT
TCATTGATTAATATAAAAAACGCCTATGAAATTTACGTGGAGCAGGAAACCTATAATGTGAGAATCATTCAGTGCCATTT
CGTGTTCGGGGTCAACCTGATGGATGAAAGAAATTTCGAACAAGCCGCACGCCATTTCAAATTGGCGCTCAACATGGCCC
AAGCAGAACAAAAAGCCCAGCTGGTTGGAAGAGCATACTACAATCTCGGGTTATGCTATTACAATCAAGACCTTCTAGAC
CCTGCCATTGATTACTTTGAAAAAGCGGTCTCCACATTTGAAAGCAGCAGGATCGTCAATTCTCTCCCGCAAGCCTATTT
TTTAATCACCCTGATTTATTATAAACAGGGAAAACATGATAAAGCTTCGGAATATCACAAGCGGGGCTATGAATATGCTA
AAGAAACAGACGATGCAGACTATGCCGTAAAATTCGAGTTTTTGCAATCCCTATATCTGGATCAGCCCAATGAAGAAGGA
ATCGAACGATGTTTCCAGTACTTAAAAAATAAAAATATGTACGCTGATATAGAGGATTTAGCCCTAGAAGTAGCAAAATA
TTACTATGAACAGAAATGGTTTAAACTGTCTGCTTCCTACTTTCTACAAGTTGAAGAGGCAAGAAAACAAATACAAAGGA
GTGAAGGTTTGTATGAAATTGAAATCTAA

Domains

Predicted by InterproScan.

• Tetratricopeptide repeat (TPR_12) (223-294)

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-66)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	100	100	1
rapF	Bacillus subtilis subsp. subtilis str. 168	57.368	99.476	0.571