Detailed information NTG0959076

Bioinformatically predicted

Overview

• Name: pilJ
• Type: Machinery gene
• Locus tag: WEU38_RS12955
• Genome accession: NZ_CP149437
• Coordinates: 3050042..3052801 (-)
• Length: 919 a.a.
• NCBI ID: WP_320001171.1
• Uniprot ID: -
• Organism: Cyanobacterium aponinum AL20118
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3045042..3057801

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
WEU38_RS12930 (WEU38_12890)	-	3045765..3046397 (+)	633	WP_155084341.1	ribonuclease HII	-
WEU38_RS12935 (WEU38_12895)	-	3046478..3046999 (+)	522	WP_320001168.1	cofactor assembly of complex C subunit B	-
WEU38_RS12940 (WEU38_12900)	-	3047003..3047755 (+)	753	WP_320001169.1	hypothetical protein	-
WEU38_RS12945 (WEU38_12905)	-	3048240..3049115 (-)	876	WP_320001170.1	ion channel	-
WEU38_RS12950 (WEU38_12910)	-	3049170..3049934 (-)	765	WP_099435893.1	MlaE family lipid ABC transporter permease subunit	-
WEU38_RS12955 (WEU38_12915)	pilJ	3050042..3052801 (-)	2760	WP_320001171.1	methyl-accepting chemotaxis protein	Machinery gene
WEU38_RS12960 (WEU38_12920)	-	3052867..3053403 (-)	537	WP_015220733.1	chemotaxis protein CheW	-
WEU38_RS12965 (WEU38_12925)	pilH	3053651..3054016 (-)	366	WP_015220734.1	response regulator transcription factor	Machinery gene
WEU38_RS12970 (WEU38_12930)	hpnH	3054240..3055253 (-)	1014	WP_155084337.1	adenosyl-hopene transferase HpnH	-
WEU38_RS12975 (WEU38_12935)	murA	3055337..3056641 (-)	1305	WP_406584792.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
WEU38_RS12980 (WEU38_12940)	ruvX	3057349..3057780 (-)	432	WP_015220737.1	Holliday junction resolvase RuvX	-

Sequence

Protein

• Length: 919 a.a.
• Molecular weight: 101582.80 Da
• Isoelectric Point: 3.8176

>NTDB_id=959076 WEU38_RS12955 WP_320001171.1 3050042..3052801(-) (pilJ) [Cyanobacterium aponinum AL20118]
MVSETDYQERFKQARTAYLEGDLAEASFITDGIMDDYPDDPSAFLLKGHIHLRQQEYDLAQVNYQKVLDLTDHQDLVTLA
KQGLAEIEEDSEDQSLYPPEVEEPDFDDEVEEIGDDDDDNWTSSIQFDSIDWDIDDLEEEEIEDPTLQQNSPFDQSFSKN
SNNPPPTLSKSEKRTEQKKSGDDDEQDEDDTAANFIDPSLDENNFDDDINLDSASNDLLSFDFDNADIDYEQFESDSNDE
DLNQDEMQDTGTPTFVVSSEDEPELSDLEQMLTGETGFLNDLDDDLGDYSSQLEPLTAGKTSTNTGLNLEDDNMPLVPEG
EEDLFFAPDELDDIPDIDADELPVSSIFTKDNKPEQIFPNVIETDENVFDSDFDNEITGSFSFDTDKINLDLEEDISVSS
SLGDISGISSSIAINPEVEVPQGKLAKYYNFSLFTKQLVHGGVTGVVTFVIVLMVSLFQGGGKNIENTSVTTAESGGETT
EQTQETRETQEIPLPFSRTLLLSLIAGISGGASTIAMGYLMTNHIKRYTNDLQNHFESIYQGDYEIKATVYSQDEFGTLA
AGFNQMTKMIYTTTTEARKRAEETERAREDLQRQVIRLLDDVEGASRGDLTVQAEVTADVLGAVADAFNVTITNLRKIVK
QVQQAAVQVNKASTDSEVFARNQSSDALRMAEELAVTLNSVQMMTDSIQRVAENAREAEEVARSSSVTALKGGDAVERTV
AGILQIRETVSETTRKVKRLAEASQQISTIVAVISQISSRTNLLALNASIQAARAGEAGRGFAIVADEVRQLADRSAKSL
QEIEQIVLQIQTETGSVMTAMEEGIQQVRDVTERSEQAKRALEDIIQVSNRIDALVRSITADTDEQRENSRGVAKVMQAV
ELTAQATSQESQRVAGSLQNLVGIAKDLISSVERFRVDD

Nucleotide

• Length: 2760 bp

>NTDB_id=959076 WEU38_RS12955 WP_320001171.1 3050042..3052801(-) (pilJ) [Cyanobacterium aponinum AL20118]
ATGGTATCAGAAACCGATTATCAAGAAAGATTTAAACAAGCTCGTACCGCTTATTTAGAAGGAGATTTAGCAGAAGCGTC
CTTCATTACCGATGGTATTATGGATGACTATCCAGATGATCCTAGTGCATTCTTACTAAAAGGTCATATTCATCTACGAC
AACAAGAATATGATTTAGCTCAAGTTAATTATCAAAAAGTCTTGGATTTAACAGATCATCAAGATTTAGTGACATTGGCT
AAACAAGGACTGGCAGAAATAGAAGAAGATAGCGAAGATCAATCTCTGTATCCTCCAGAGGTAGAAGAGCCAGATTTTGA
CGATGAAGTGGAAGAAATCGGTGACGATGATGATGATAATTGGACAAGCAGTATCCAATTTGACAGTATTGATTGGGATA
TAGATGATTTAGAAGAAGAAGAAATAGAAGATCCCACCCTACAGCAAAATTCTCCCTTTGATCAAAGTTTCTCTAAAAAT
TCCAATAATCCTCCTCCCACATTGAGTAAAAGTGAAAAACGCACAGAGCAAAAAAAATCAGGGGATGATGATGAACAGGA
TGAAGATGATACTGCTGCTAATTTTATTGACCCCTCTTTGGACGAAAACAATTTTGACGATGATATAAATTTAGATAGTG
CATCTAATGATTTGTTGAGCTTTGATTTTGATAATGCTGATATAGATTATGAACAGTTTGAAAGTGATTCTAATGATGAA
GATCTAAATCAAGATGAAATGCAAGATACGGGAACTCCCACTTTTGTTGTGTCTAGTGAAGATGAACCTGAATTGAGCGA
TTTAGAACAAATGTTGACGGGGGAGACTGGTTTCCTTAATGATTTAGATGATGACTTGGGAGATTACAGTTCACAGTTAG
AACCTTTAACTGCTGGTAAAACTTCAACTAATACGGGATTAAATTTAGAGGATGATAATATGCCTCTCGTACCCGAAGGA
GAAGAAGATTTATTTTTTGCCCCCGATGAGTTAGATGATATTCCCGACATTGATGCTGATGAGTTGCCAGTTTCGAGCAT
TTTTACAAAGGATAATAAACCAGAGCAAATATTTCCCAATGTTATAGAAACAGATGAGAATGTTTTTGATAGTGATTTTG
ATAATGAAATTACGGGGAGTTTTTCCTTTGATACAGATAAAATTAATTTAGATTTGGAAGAAGATATAAGTGTTTCTTCT
TCTTTAGGAGATATTTCTGGCATATCCTCGTCTATTGCTATTAATCCAGAAGTAGAAGTTCCCCAAGGAAAACTTGCCAA
ATATTATAATTTTTCCCTATTCACTAAACAATTAGTACATGGTGGTGTTACAGGAGTTGTTACTTTTGTGATTGTGTTAA
TGGTAAGTTTGTTTCAAGGGGGAGGTAAGAATATAGAAAATACAAGTGTGACGACTGCTGAATCTGGAGGAGAAACGACC
GAACAAACTCAAGAAACAAGGGAAACTCAAGAAATACCATTGCCTTTTTCTCGGACATTGTTGTTAAGTTTAATCGCTGG
TATTAGTGGTGGAGCTTCTACCATTGCAATGGGTTATTTGATGACTAATCACATTAAACGCTATACCAATGACTTGCAAA
ATCACTTTGAATCCATTTATCAGGGTGATTATGAGATAAAAGCAACGGTTTATTCTCAAGATGAGTTTGGTACTTTAGCT
GCTGGTTTTAATCAGATGACAAAAATGATTTATACCACTACCACAGAGGCGAGAAAGAGGGCTGAAGAGACGGAGAGAGC
AAGGGAGGATTTACAAAGACAGGTTATTCGTCTTCTTGATGATGTGGAAGGAGCTTCTAGGGGTGATTTAACGGTACAAG
CTGAGGTAACAGCAGACGTATTAGGGGCGGTAGCGGATGCTTTCAACGTGACTATTACTAACTTGCGGAAAATCGTTAAA
CAGGTACAACAGGCGGCGGTACAGGTTAACAAAGCAAGTACTGATAGTGAGGTGTTTGCTCGTAATCAATCGAGTGATGC
GTTGCGGATGGCGGAAGAATTGGCCGTTACGTTAAATTCTGTTCAGATGATGACAGATTCAATTCAGAGGGTGGCAGAAA
ACGCCAGAGAAGCGGAAGAGGTGGCCCGTTCCTCTAGTGTTACGGCTTTAAAGGGTGGTGATGCGGTAGAAAGAACTGTT
GCTGGTATTTTGCAGATTAGGGAAACAGTGTCAGAAACAACCCGAAAGGTAAAAAGATTGGCAGAGGCATCCCAACAAAT
TTCAACGATTGTGGCTGTTATTTCTCAGATTTCTTCTCGTACCAACCTATTAGCTTTAAATGCTTCTATTCAGGCCGCAA
GAGCAGGAGAGGCGGGGAGAGGATTTGCGATCGTTGCTGATGAGGTACGACAGTTAGCAGATAGGTCAGCAAAATCCTTG
CAAGAAATTGAACAAATTGTATTACAAATTCAAACAGAAACTGGTTCGGTTATGACGGCGATGGAAGAGGGTATTCAACA
GGTAAGAGATGTAACCGAGAGGTCTGAACAGGCAAAACGGGCATTGGAAGATATTATTCAAGTGTCCAATCGTATTGATG
CCTTGGTGCGATCGATTACAGCAGATACTGATGAGCAGAGAGAAAATTCCCGAGGGGTAGCAAAAGTAATGCAGGCGGTT
GAATTGACAGCTCAGGCAACTTCTCAAGAATCTCAGAGAGTAGCTGGTTCTTTGCAAAATTTGGTGGGCATTGCCAAAGA
TTTAATTTCCTCTGTGGAACGTTTTAGGGTTGATGATTAG

Domains

Predicted by InterproScan.

• Methyl-accepting chemotaxis protein (MCP) signalling domain (MCPsignal) (700-881)

• HAMP domain (HAMP) (521-570)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilJ	Synechocystis sp. PCC 6803	47.246	100	0.485