Detailed information NTG0958995

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: ACI3M9_RS22640
• Genome accession: NZ_CP173438
• Coordinates: 4551766..4552791 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain 98889
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4546766..4557791

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACI3M9_RS22620 (ACI3M9_22625)	metJ	4547951..4548268 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
ACI3M9_RS22625 (ACI3M9_22630)	yiiX	4548328..4548936 (+)	609	WP_000702314.1	YiiX family permuted papain-like enzyme	-
ACI3M9_RS22630 (ACI3M9_22635)	rpmE	4548997..4549209 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
ACI3M9_RS22635 (ACI3M9_22640)	priA	4549412..4551610 (+)	2199	WP_001296625.1	primosomal protein N'	Machinery gene
ACI3M9_RS22640 (ACI3M9_22645)	cytR	4551766..4552791 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
ACI3M9_RS22645 (ACI3M9_22650)	ftsN	4552883..4553842 (+)	960	WP_000068834.1	cell division protein FtsN	-
ACI3M9_RS22650 (ACI3M9_22655)	hslV	4553935..4554465 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
ACI3M9_RS22655 (ACI3M9_22660)	hslU	4554475..4555806 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
ACI3M9_RS22660 (ACI3M9_22665)	menA	4555873..4556799 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
ACI3M9_RS22665 (ACI3M9_22670)	rraA	4556892..4557377 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
ACI3M9_RS22670 (ACI3M9_22675)	zapB	4557462..4557707 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=958995 ACI3M9_RS22640 WP_000644908.1 4551766..4552791(+) (cytR) [Escherichia coli strain 98889]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=958995 ACI3M9_RS22640 WP_000644908.1 4551766..4552791(+) (cytR) [Escherichia coli strain 98889]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625