Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   ACI5EZ_RS13225 Genome accession   NZ_CP173428
Coordinates   2742232..2743173 (-) Length   313 a.a.
NCBI ID   WP_031958028.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain CRAB_1     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2737232..2748173
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ACI5EZ_RS13210 bauB 2739543..2740511 (-) 969 WP_001104132.1 siderophore-binding periplasmic lipoprotein BauB -
  ACI5EZ_RS13215 bauE 2740518..2741288 (-) 771 WP_000582116.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  ACI5EZ_RS13220 bauC 2741285..2742232 (-) 948 WP_001223271.1 ferric acinetobactin ABC transporter permease subunit BauC -
  ACI5EZ_RS13225 ceuB 2742232..2743173 (-) 942 WP_031958028.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  ACI5EZ_RS13230 - 2743173..2743304 (-) 132 WP_002036877.1 hypothetical protein -
  ACI5EZ_RS13235 basB 2743805..2745835 (+) 2031 WP_000939841.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  ACI5EZ_RS13240 basA 2745906..2747753 (-) 1848 WP_000910243.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 34024.11 Da        Isoelectric Point: 8.6941

>NTDB_id=958905 ACI5EZ_RS13225 WP_031958028.1 2742232..2743173(-) (ceuB) [Acinetobacter baumannii strain CRAB_1]
MRFGLFCIFIILCICSLLLGAEPIQWTTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWFLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLICDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=958905 ACI5EZ_RS13225 WP_031958028.1 2742232..2743173(-) (ceuB) [Acinetobacter baumannii strain CRAB_1]
ATGCGATTTGGCTTATTCTGTATTTTTATCATTTTATGTATTTGCTCGTTATTGCTCGGGGCTGAGCCAATACAGTGGAC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATCCCTCGTTTAATCACTATTGTGCTCA
CCGGTATCGGGTTGGCGGTATGTGGCGTCATCTTGCAGCATATTGTGCGTAACAAGTTTGTTGAACCGGAAACTTCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCGTTAACTTTAGTTCCGGTAACCAGCACGCTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATTCGCCGGATCCGTTTTAGAAATACGGTTTTAG
TACCAGTTATTGGCTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGTTTTTAGGAGATTTTTCAAAAATTGTCCAAGGCCACTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTCGCACACCGCTTTACCGTAATTGGTATGGGGGAAGAGATGGCTTCTAGTTTGGGACTCA
GTTATGCAGCTATAGCCGCCATTGGTTTGATACTGGTTGCCATTACAGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTAGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCGATTGTGGC
TTTGGGTGGGGCATCTCTATTACTGATTTGTGACATTCTTGGCCGCTCAATCATTTACCCATTTGAAGTGCCGATCGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

43.919

94.569

0.415