Detailed information NTG0958879

Bioinformatically predicted

Overview

• Name: rpoN/rpoN1
• Type: Machinery gene
• Locus tag: ACI5EZ_RS03390
• Genome accession: NZ_CP173428
• Coordinates: 697239..698687 (+)
• Length: 482 a.a.
• NCBI ID: WP_000778202.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain CRAB_1
• Function: type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake

Genomic Context

Location: 692239..703687

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACI5EZ_RS03390	rpoN/rpoN1	697239..698687 (+)	1449	WP_000778202.1	RNA polymerase factor sigma-54	Machinery gene
ACI5EZ_RS03395	hpf	698856..699194 (+)	339	WP_001167461.1	ribosome hibernation-promoting factor, HPF/YfiA family	-
ACI5EZ_RS03400	ibaG	699333..699584 (+)	252	WP_001083680.1	BolA family iron metabolism protein IbaG	-
ACI5EZ_RS03405	murA	699591..700847 (+)	1257	WP_000357156.1	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	-
ACI5EZ_RS03410	hisG	700847..701530 (+)	684	WP_001000724.1	ATP phosphoribosyltransferase	-
ACI5EZ_RS03415	hisD	701636..702925 (+)	1290	WP_002036490.1	histidinol dehydrogenase	-

Sequence

Protein

• Length: 482 a.a.
• Molecular weight: 55082.97 Da
• Isoelectric Point: 4.6620

>NTDB_id=958879 ACI5EZ_RS03390 WP_000778202.1 697239..698687(+) (rpoN/rpoN1) [Acinetobacter baumannii strain CRAB_1]
MKLSVGLKVANSLSLTPQLQQAIRLLQLSSLELEQEIQIQLDSNPLLEKVEDESLAESLSTLEHKETDDLTTELNADHLP
DDLPVDTEWDDIYTHQSTALGTPEFEEREDNRQVHLTLKEHILEQVNLLHFSKIDQLIAYCIVDALDDKGFLDAELEEII
LAVQHLLSEMDIDEEVEEDEVLVVLKHIQRLDPIGIGARNLAECLKVQLEFLPRETEYLKEARSLLQYYELLIANDLNKL
LKQTGLSKEQLKFAVDLLKTLKPYPGMDFEKQESEYQIPDVVVAKKDLHWQVQLNPDVMPKLRINSFYSSMIRRADQSDD
NLYLRNQMLEAKNFIKSIDERHKTLLKVATCIVEHQKAFLEIGPEAMKPLVLRDVAEEVELHESTVSRVTTNKYMLTPRG
LFELKYFFSSHVGTTTGGEASSTAIRAMIKKLVSNENPRKPLSDNAIAALLKEEGIEVARRTVAKYRESLHIPSSSERKV
LI

Nucleotide

• Length: 1449 bp

>NTDB_id=958879 ACI5EZ_RS03390 WP_000778202.1 697239..698687(+) (rpoN/rpoN1) [Acinetobacter baumannii strain CRAB_1]
ATGAAATTATCTGTTGGATTGAAAGTTGCGAATTCATTATCGTTAACGCCTCAATTGCAGCAGGCAATCCGTTTACTACA
ACTTTCTAGCCTAGAGTTAGAGCAAGAAATCCAAATTCAATTAGATAGTAATCCATTACTTGAAAAAGTAGAAGATGAAT
CACTAGCAGAAAGTTTATCTACTTTAGAACACAAAGAAACTGATGACCTTACAACAGAGTTGAATGCTGATCACTTACCT
GATGACTTGCCTGTTGATACTGAATGGGATGACATTTATACACATCAATCCACTGCTTTGGGTACTCCTGAGTTCGAAGA
GCGTGAAGATAATCGCCAAGTACACCTGACGCTTAAAGAACATATTTTGGAGCAAGTGAACTTACTACATTTTTCAAAAA
TAGATCAGTTGATTGCTTATTGCATAGTTGATGCTTTAGATGATAAAGGTTTTTTGGATGCTGAATTAGAAGAGATTATT
TTGGCAGTACAGCATTTATTAAGTGAGATGGATATAGACGAGGAAGTGGAAGAGGATGAAGTTTTAGTAGTCTTAAAACA
TATTCAACGTCTTGATCCAATTGGTATCGGAGCTCGTAATTTAGCTGAATGTTTAAAAGTTCAGTTGGAGTTTTTGCCTC
GAGAAACTGAATATTTGAAAGAAGCCAGAAGTCTACTTCAATATTACGAATTACTGATTGCAAATGATCTTAATAAATTA
TTGAAGCAAACAGGGCTTTCCAAAGAACAGTTAAAATTTGCAGTTGATTTATTAAAAACATTAAAGCCTTATCCAGGCAT
GGATTTTGAAAAGCAAGAATCAGAATATCAAATTCCTGATGTAGTCGTTGCCAAGAAGGACTTGCATTGGCAAGTTCAGT
TAAATCCTGATGTGATGCCAAAATTAAGAATCAATTCTTTTTATTCGAGTATGATTCGTAGGGCAGATCAAAGTGATGAT
AATTTATACCTACGTAATCAAATGCTTGAGGCTAAAAATTTTATAAAAAGTATTGATGAACGGCACAAAACATTATTAAA
AGTTGCGACTTGTATTGTTGAGCATCAAAAAGCATTTCTTGAAATAGGTCCCGAAGCAATGAAACCCTTAGTACTAAGGG
ATGTTGCAGAAGAAGTAGAATTACATGAGTCGACCGTTTCTCGCGTTACCACAAATAAGTATATGCTTACTCCACGTGGA
CTTTTTGAGTTGAAATACTTCTTTTCTAGTCATGTGGGGACAACCACAGGAGGTGAGGCTTCTTCTACCGCAATTCGGGC
GATGATTAAAAAGTTAGTTTCTAATGAAAATCCGCGTAAACCTTTGTCTGATAATGCAATTGCTGCTTTATTGAAAGAAG
AGGGAATAGAAGTAGCTAGAAGGACTGTAGCAAAATATAGAGAATCGTTACATATTCCATCGTCATCCGAGAGAAAAGTC
TTGATCTAA

Domains

Predicted by InterProScan.

• Sigma-54 factor, core binding domain (Sigma54_CBD) (111-308)

• Sigma-54, DNA binding domain (Sigma54_DBD) (323-479)

• Sigma-54 factor, Activator interacting domain (AID) (Sigma54_AID) (7-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoN/rpoN1	Ralstonia pseudosolanacearum GMI1000	43.333	100	0.459