Detailed information NTG0958715

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: ACI2O8_RS01305
• Genome accession: NZ_CP173415
• Coordinates: 217753..218829 (+)
• Length: 358 a.a.
• NCBI ID: WP_214288297.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain FJYA24
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 212753..223829

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACI2O8_RS01280 (ACI2O8_01280)	-	213591..213869 (+)	279	WP_017696800.1	hemolysin XhlA family protein	-
ACI2O8_RS01285 (ACI2O8_01285)	-	213885..214148 (+)	264	WP_095843439.1	phage holin	-
ACI2O8_RS01290 (ACI2O8_01290)	-	214200..215174 (+)	975	WP_095843440.1	N-acetylmuramoyl-L-alanine amidase	-
ACI2O8_RS01295 (ACI2O8_01295)	-	215212..215652 (-)	441	WP_042977637.1	SMI1/KNR4 family protein	-
ACI2O8_RS01300 (ACI2O8_01300)	-	215665..217485 (-)	1821	WP_128473524.1	T7SS effector LXG polymorphic toxin	-
ACI2O8_RS01305 (ACI2O8_01305)	rapC	217753..218829 (+)	1077	WP_214288297.1	tetratricopeptide repeat protein	Regulator
ACI2O8_RS01310 (ACI2O8_01310)	-	218819..218977 (+)	159	WP_164907155.1	hypothetical protein	-
ACI2O8_RS01315 (ACI2O8_01315)	-	219009..219341 (-)	333	WP_087961654.1	YolD-like family protein	-
ACI2O8_RS01320 (ACI2O8_01320)	-	219447..219674 (+)	228	WP_087961653.1	hypothetical protein	-
ACI2O8_RS01325 (ACI2O8_01325)	-	219667..219879 (+)	213	WP_087961652.1	transcriptional regulator	-

Sequence

Protein

• Length: 358 a.a.
• Molecular weight: 42418.35 Da
• Isoelectric Point: 5.2241

>NTDB_id=958715 ACI2O8_RS01305 WP_214288297.1 217753..218829(+) (rapC) [Bacillus subtilis strain FJYA24]
MIRQFSVPDAEILKAEVEREIKQMEEDEYLLIYYSLMSFRHQLMLDYLEPEKKYRTARPTISELLEKIEAPQKKLTGLLK
YYSLFFRGMYEFDQQEFVEAINYYRKAEKELYAVTDEIEQAEFHFKVAEAYYNMKQTHVSMHHILKALEIYDQNPLYTVR
KIQSLFVIVGNYLDFKHYEKGLKHLEEALKLSKELGHDRLISSALYNLGECYHYMGQPSKAEGYLKEAAEVAERANLRTL
PHTLHSLATVLFKQEKFNEGQKVLQQGIETAQKFNDELFLSMNQFLNALYIESVDKQGILNILNHLNESHMFSFTEHITL
LTAEYYREGGEFEESSFFYDKMVEAQLQIQRGDCLYEY

Nucleotide

• Length: 1077 bp

>NTDB_id=958715 ACI2O8_RS01305 WP_214288297.1 217753..218829(+) (rapC) [Bacillus subtilis strain FJYA24]
ATGATACGTCAGTTTAGTGTTCCGGATGCTGAAATTTTAAAAGCAGAAGTTGAAAGAGAAATTAAACAAATGGAAGAGGA
TGAGTATTTACTAATTTATTACTCACTAATGAGCTTTCGACACCAACTTATGCTCGACTACTTAGAGCCGGAAAAAAAGT
ATAGAACAGCACGTCCAACCATCTCAGAATTACTTGAAAAAATTGAAGCTCCCCAAAAGAAATTAACCGGTCTCCTGAAA
TATTACTCACTATTTTTCCGCGGTATGTATGAATTTGATCAGCAAGAATTCGTGGAAGCTATTAACTATTACCGTAAAGC
TGAAAAAGAACTTTATGCTGTTACTGATGAAATCGAACAAGCTGAATTTCATTTTAAGGTGGCAGAAGCTTATTACAACA
TGAAACAAACTCACGTTTCCATGCATCACATTTTAAAGGCATTAGAGATTTATGATCAGAATCCGCTGTATACTGTAAGG
AAAATTCAAAGCTTGTTTGTAATCGTAGGTAACTATCTCGATTTTAAACATTATGAAAAAGGGTTAAAACATCTTGAAGA
AGCCCTGAAGCTTTCTAAGGAATTAGGGCACGACAGACTAATAAGTTCTGCTTTGTATAATTTAGGTGAATGTTATCATT
ACATGGGACAACCAAGTAAAGCTGAAGGATATTTGAAAGAAGCAGCTGAGGTTGCAGAAAGAGCAAATTTAAGGACACTT
CCTCATACGCTCCATTCGTTGGCCACAGTTTTATTCAAGCAGGAAAAGTTTAATGAAGGACAGAAGGTTTTACAGCAAGG
GATCGAAACAGCACAAAAATTCAATGATGAACTTTTCCTATCGATGAATCAGTTTCTGAATGCCCTATATATTGAGTCTG
TTGATAAACAGGGTATCCTCAATATATTGAATCATCTTAATGAAAGTCACATGTTTTCATTTACGGAACACATAACGCTG
CTAACTGCAGAATATTATAGAGAAGGCGGAGAATTTGAAGAATCCAGTTTTTTCTATGATAAAATGGTTGAAGCGCAGCT
TCAAATTCAGCGAGGTGACTGTTTATATGAGTATTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (1-46)

• Tetratricopeptide repeat (TPR_12) (178-233)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	42.458	100	0.425
rapF	Bacillus subtilis subsp. subtilis str. 168	39.665	100	0.397