Detailed information NTG0958694

Bioinformatically predicted

Overview

• Name: radA/sms
• Type: Machinery gene
• Locus tag: ACI3L8_RS10630
• Genome accession: NZ_CP173391
• Coordinates: 2317226..2318605 (+)
• Length: 459 a.a.
• NCBI ID: WP_045369724.1
• Uniprot ID: -
• Organism: Vibrio campbellii strain LB3
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2312226..2323605

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACI3L8_RS10615 (ACI3L8_10615)	-	2312996..2313601 (-)	606	WP_012128802.1	YtjB family periplasmic protein	-
ACI3L8_RS10620 (ACI3L8_10620)	serB	2313693..2314673 (+)	981	WP_038891096.1	phosphoserine phosphatase	-
ACI3L8_RS10625 (ACI3L8_10625)	-	2314726..2317074 (-)	2349	WP_404971401.1	PilZ domain-containing protein	-
ACI3L8_RS10630 (ACI3L8_10630)	radA/sms	2317226..2318605 (+)	1380	WP_045369724.1	DNA repair protein RadA	Machinery gene
ACI3L8_RS10635 (ACI3L8_10635)	fusA	2318822..2320909 (+)	2088	WP_005530296.1	elongation factor G	-
ACI3L8_RS10640 (ACI3L8_10640)	-	2321056..2321907 (-)	852	WP_404971402.1	hypothetical protein	-

Sequence

Protein

• Length: 459 a.a.
• Molecular weight: 49305.72 Da
• Isoelectric Point: 7.4131

>NTDB_id=958694 ACI3L8_RS10630 WP_045369724.1 2317226..2318605(+) (radA/sms) [Vibrio campbellii strain LB3]
MAKAKRAYVCNDCGADFPRWQGQCNACGAWNTITEVRIAASPTVARNERLSGYAGSATESKVQTLSEIDLQEVPRFTSGF
KELDRVLGGGVVPGAAILIGGNPGAGKSTLLLQTMCLLSSQMPTLYVTGEESLQQVAMRASRLGLPKEHLKMLSETNVDK
ICQIAEKEQPRIMVIDSIQVMHVSDVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIIDCSV
LLDGGTDSRFRTLRSHKNRFGAVNELGVFAMTGQGLKEVNNPSAIFLSRGEEETSGSSVMVVWEGTRPLLVEIQALVDYS
QLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVNVVGGVKVTETSADLALVMALLSSFRDRPLPKDVVVFGEVG
LAGEIRPVPSGQERLNEAFKHGFKKAIVPAANMPKGGIPGMQIHGVKKLSEAIEAFDEL

Nucleotide

• Length: 1380 bp

>NTDB_id=958694 ACI3L8_RS10630 WP_045369724.1 2317226..2318605(+) (radA/sms) [Vibrio campbellii strain LB3]
ATGGCGAAAGCAAAACGAGCGTATGTTTGTAATGATTGTGGCGCGGATTTCCCACGTTGGCAGGGGCAGTGTAATGCGTG
TGGTGCATGGAACACAATTACTGAAGTTCGTATTGCTGCATCGCCAACGGTAGCACGCAACGAACGCTTATCTGGTTACG
CAGGCTCAGCAACGGAATCAAAAGTTCAAACCCTGTCAGAGATTGATCTGCAAGAAGTGCCCCGTTTTACGAGTGGCTTT
AAAGAGCTAGACCGAGTACTTGGTGGTGGTGTGGTTCCGGGCGCTGCGATTCTTATCGGTGGTAACCCCGGCGCAGGTAA
GTCGACTTTGCTTTTGCAAACCATGTGTCTGTTGTCTTCGCAAATGCCTACTCTCTATGTGACGGGTGAGGAATCGCTCC
AGCAAGTGGCAATGCGTGCTTCACGACTTGGGTTGCCAAAAGAGCACCTGAAGATGTTGTCGGAAACAAACGTCGACAAG
ATTTGCCAAATTGCAGAGAAAGAACAGCCGCGCATTATGGTGATTGACTCGATTCAGGTAATGCACGTGTCTGATGTTCA
GTCGTCGCCGGGGAGTGTCGCTCAGGTACGTGAATCGGCAACCGCGCTGACGCGTTATGCAAAGCAAAATAATGTGGCCG
TCTTTATTGTTGGTCACGTAACAAAAGATGGTACCCTTGCCGGCCCTAAAGTACTTGAGCACATTATTGACTGTTCAGTT
CTACTCGATGGTGGTACTGATAGCCGCTTCCGAACCTTACGTAGCCACAAAAACCGTTTTGGTGCGGTGAATGAACTTGG
CGTCTTTGCCATGACGGGGCAGGGACTGAAAGAGGTCAATAACCCTTCGGCGATTTTCCTTTCCCGCGGTGAAGAAGAGA
CGTCGGGTTCGTCCGTTATGGTGGTGTGGGAAGGTACGCGCCCTCTATTAGTAGAGATTCAAGCACTGGTGGACTACTCA
CAATTGGCAAACCCACGTCGCGTCGCGGTGGGCCTAGAACAAAACCGTCTGTCTTTATTATTGGCGGTGCTGCATAAGCA
CGGTGGCCTACAAATGGCCGATCAAGATGTGTTTGTGAATGTCGTTGGTGGTGTAAAAGTCACAGAGACCAGTGCTGACC
TTGCGCTAGTTATGGCGCTTTTGTCGAGTTTTCGCGATCGTCCACTACCAAAAGATGTGGTGGTGTTTGGTGAGGTTGGC
TTAGCGGGAGAGATTCGCCCAGTGCCGAGTGGCCAAGAGCGTTTGAATGAAGCATTCAAGCACGGCTTTAAGAAAGCGAT
CGTACCAGCAGCGAATATGCCAAAGGGCGGTATTCCTGGTATGCAAATCCATGGCGTTAAAAAACTGTCGGAGGCTATCG
AAGCATTTGATGAGTTGTAA

Domains

Predicted by InterProScan.

• AAA domain (AAA_25) (83-224)

• Rubredoxin metal binding domain (Zn_ribbon_LapB) (8-35)

• Subunit ChlI of Mg-chelatase (ChlI) (347-432)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radA/sms	Bacillus subtilis subsp. subtilis str. 168	46.711	99.346	0.464
radA	Streptococcus mitis SK321	44.079	99.346	0.438
radA	Streptococcus pneumoniae Rx1	43.516	99.129	0.431
radA	Streptococcus pneumoniae D39	43.516	99.129	0.431
radA	Streptococcus pneumoniae R6	43.516	99.129	0.431
radA	Streptococcus pneumoniae TIGR4	43.516	99.129	0.431
radA	Streptococcus mitis NCTC 12261	43.516	99.129	0.431