Detailed information NTG0958559

Bioinformatically predicted

Overview

• Name: priA
• Type: Machinery gene
• Locus tag: ACI3L5_RS02255
• Genome accession: NZ_CP173389
• Coordinates: 478551..480752 (-)
• Length: 733 a.a.
• NCBI ID: WP_399424121.1
• Uniprot ID: -
• Organism: Vibrio campbellii strain LB10
• Function: DNA puliing through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 473551..485752

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACI3L5_RS02235 (ACI3L5_02235)	hslU	474589..475920 (-)	1332	WP_404973381.1	HslU--HslV peptidase ATPase subunit	-
ACI3L5_RS02240 (ACI3L5_02240)	hslV	475950..476501 (-)	552	WP_005435051.1	ATP-dependent protease subunit HslV	-
ACI3L5_RS02245 (ACI3L5_02245)	-	476617..477168 (-)	552	WP_005429952.1	SPOR domain-containing protein	-
ACI3L5_RS02250 (ACI3L5_02250)	cytR	477337..478347 (-)	1011	Protein_402	DNA-binding transcriptional regulator CytR	-
ACI3L5_RS02255 (ACI3L5_02255)	priA	478551..480752 (-)	2202	WP_399424121.1	primosomal protein N'	Machinery gene
ACI3L5_RS02260 (ACI3L5_02260)	rpmE	481048..481266 (+)	219	WP_038890899.1	50S ribosomal protein L31	-
ACI3L5_RS02265 (ACI3L5_02265)	rpsJ	481740..482051 (+)	312	WP_004410492.1	30S ribosomal protein S10	-
ACI3L5_RS02270 (ACI3L5_02270)	rplC	482066..482695 (+)	630	WP_005435072.1	50S ribosomal protein L3	-
ACI3L5_RS02275 (ACI3L5_02275)	rplD	482713..483315 (+)	603	WP_005435074.1	50S ribosomal protein L4	-
ACI3L5_RS02280 (ACI3L5_02280)	rplW	483312..483614 (+)	303	WP_004398471.1	50S ribosomal protein L23	-
ACI3L5_RS02285 (ACI3L5_02285)	rplB	483630..484454 (+)	825	WP_005528534.1	50S ribosomal protein L2	-
ACI3L5_RS02290 (ACI3L5_02290)	rpsS	484476..484754 (+)	279	WP_005431614.1	30S ribosomal protein S19	-
ACI3L5_RS02295 (ACI3L5_02295)	rplV	484765..485097 (+)	333	WP_005528535.1	50S ribosomal protein L22	-

Sequence

Protein

• Length: 733 a.a.
• Molecular weight: 82017.52 Da
• Isoelectric Point: 8.7448

>NTDB_id=958559 ACI3L5_RS02255 WP_399424121.1 478551..480752(-) (priA) [Vibrio campbellii strain LB10]
MRPSIARVALPVPLDKQFDYVIPSHLFPVIGGRVSVPFGRQTLVGIVTAMVNHSDFPKEQLKAIKAVLDAQPVWPEKLYS
LLTWCSQFYQYPLGDTLHNAMPAALRKGKPADFATLQEWQITASGKDKLMQGLGRAVKQQRALQMLVNGSVPHQEFIDQE
IGSTVLKSLEERGWVERIEKKPTITKWGQQVEFDVEKPKLNHEQALAIASVNSQTGFACYLLEGVTGSGKTEVYLNLIKP
VLEQGKQALVLVPEIGLTPQTINRFKRRFNVPVDVIHSGLNDTERLNAWLSARDKAAGIIIGTRSALLTPFADLGIIIVD
EEHDSSYKQQDSLRYHARDVAVMRAHKEQVPIVLGSATPALETLHNALTGKYHHLTLTQRAGSAVPTTNKVLDVKGLYLD
SGLSAPLIAEMRKHLKAGNQVMLFLNRRGFSPALMCHECGWIAECKRCDAYYTFHQYSNEIRCHHCGSQQPVINQCQGCG
STQLVTVGVGTEQLELQLAELFPEYKAIRIDRDSTRRKGSLEDALESIRKGEYQILIGTQMLAKGHHFPNVTLVALLDVD
GSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVILQTHHPEHSLLQALLQKDYRHFAMTALEERKLAQLPPYSFLTLFK
AEANQSEVVEDFLRQVRFTLESHPLFDDSCMVLGPTPSPLAKRAGKYRWQLLLQTQHRSLMQKLLTSAKPAIELLPNAKK
VRWNLDIEPQDLS

Nucleotide

• Length: 2202 bp

>NTDB_id=958559 ACI3L5_RS02255 WP_399424121.1 478551..480752(-) (priA) [Vibrio campbellii strain LB10]
ATGCGTCCATCCATCGCCCGAGTAGCACTGCCAGTCCCGCTCGACAAACAGTTTGACTATGTCATACCTAGTCACCTTTT
CCCTGTGATTGGCGGACGCGTTTCTGTGCCTTTTGGTCGGCAGACTTTGGTTGGCATCGTGACCGCCATGGTTAATCATT
CAGACTTTCCCAAAGAGCAACTGAAAGCGATTAAAGCGGTATTAGATGCCCAACCAGTTTGGCCAGAAAAACTCTATTCT
TTATTGACTTGGTGCAGCCAGTTTTACCAGTATCCACTTGGTGACACACTTCATAATGCAATGCCTGCTGCCCTGCGTAA
GGGAAAACCTGCCGATTTCGCGACATTACAAGAGTGGCAAATCACTGCGTCGGGTAAAGATAAGCTGATGCAAGGCTTAG
GGCGAGCAGTCAAGCAACAGCGTGCTTTGCAGATGCTGGTCAATGGTTCAGTGCCACACCAAGAGTTCATCGACCAAGAA
ATTGGCTCTACCGTACTTAAGTCTTTGGAAGAGAGAGGCTGGGTCGAACGTATAGAGAAAAAGCCGACGATCACTAAGTG
GGGCCAACAAGTTGAGTTCGATGTTGAAAAACCAAAGCTCAACCACGAGCAAGCTTTGGCGATTGCTAGCGTAAACAGCC
AAACTGGCTTTGCCTGCTATTTATTAGAGGGCGTTACAGGTTCCGGTAAAACCGAAGTTTACCTTAACCTCATTAAGCCA
GTACTGGAACAAGGCAAGCAAGCTTTGGTGCTCGTCCCTGAGATAGGCCTGACACCCCAAACTATTAACCGCTTCAAGCG
TCGCTTCAATGTGCCTGTGGATGTCATTCACTCTGGGTTAAATGATACCGAGCGACTCAACGCTTGGCTTTCTGCGCGAG
ACAAAGCCGCCGGCATCATTATTGGTACGCGCTCTGCCCTACTGACGCCTTTTGCTGATCTTGGCATTATCATTGTCGAT
GAAGAACACGACTCGTCTTATAAACAACAAGATAGCCTGCGCTACCATGCTCGTGATGTTGCGGTGATGCGTGCACATAA
AGAGCAAGTACCTATTGTCCTCGGCTCTGCCACGCCGGCCTTAGAAACACTACACAACGCATTGACAGGCAAGTACCACC
ATTTAACGCTGACGCAACGCGCCGGTTCTGCCGTTCCGACCACTAATAAGGTACTTGATGTTAAAGGCCTCTATCTAGAC
AGTGGCTTATCCGCACCTTTGATTGCTGAAATGCGTAAACACCTTAAAGCGGGCAACCAAGTGATGCTGTTCTTAAACCG
TCGCGGCTTCTCACCGGCGTTAATGTGCCATGAATGTGGCTGGATTGCGGAATGTAAACGCTGTGATGCTTACTACACCT
TCCACCAATACAGCAATGAGATTCGCTGTCACCATTGTGGCTCACAGCAGCCTGTCATTAATCAATGCCAAGGTTGTGGT
TCGACTCAGTTGGTCACTGTGGGTGTGGGTACCGAACAGCTTGAGTTGCAACTGGCTGAGCTCTTCCCAGAATACAAAGC
CATTCGTATTGATAGAGACAGCACGCGCCGTAAAGGTAGCCTAGAAGATGCACTCGAATCGATTCGTAAAGGCGAATACC
AAATTCTAATTGGTACGCAGATGTTAGCAAAAGGTCACCACTTCCCAAATGTGACGCTTGTTGCGCTACTCGATGTTGAT
GGTTCCCTCTATAGTAGTGACTTCCGCGCCTCCGAGAGACTGGCTCAACTGTTTATTCAGGTCGCAGGTCGCGCAGGTCG
CGCAAGCAAACCCGGTGAAGTGATATTGCAAACTCACCACCCAGAACACAGTTTACTGCAAGCTCTACTGCAGAAAGACT
ATCGCCACTTCGCTATGACCGCATTGGAAGAGCGTAAACTCGCCCAACTGCCACCGTATAGCTTCTTGACCTTATTTAAA
GCAGAAGCGAACCAAAGCGAAGTGGTCGAAGACTTTTTACGTCAGGTACGTTTTACCCTTGAATCGCACCCATTGTTCGA
TGATAGCTGCATGGTGTTGGGGCCGACACCATCACCACTGGCTAAGCGCGCTGGCAAATATCGATGGCAGCTTTTACTGC
AAACTCAGCATCGCTCATTGATGCAAAAGTTATTAACCAGTGCGAAACCTGCTATTGAGTTGTTGCCAAATGCCAAGAAA
GTTCGCTGGAATTTAGACATAGAGCCACAGGATCTCAGCTAG

Domains

Predicted by InterProScan.

• PriA DNA helicase Cys-rich region (CRR) domain (Zn_ribbon_PriA) (445-471)

• 3DNA-binding domain (3BD) (PriA_3primeBD) (7-102)

• Helicase conserved C-terminal domain (Helicase_C) (499-588)

• DEAD/DEAH box helicase (DEAD) (219-364)

• Primosomal protein N C-terminal domain (PriA_C) (632-729)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
priA	Acinetobacter baumannii D1279779	44.626	100	0.447