Detailed information NTG0957779

Bioinformatically predicted

Overview

• Name: priA
• Type: Machinery gene
• Locus tag: ACIRXL_RS07910
• Genome accession: NZ_CP173236
• Coordinates: 1594967..1597153 (+)
• Length: 728 a.a.
• NCBI ID: WP_410680788.1
• Uniprot ID: -
• Organism: Avibacterium paragallinarum strain npAP/GA-USA/20231216/S1-1
• Function: DNA puliing through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1589967..1602153

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACIRXL_RS07880 (ACIRXL_07880)	tmk	1590158..1590787 (+)	630	WP_410680793.1	dTMP kinase	-
ACIRXL_RS07885 (ACIRXL_07885)	-	1590793..1591785 (+)	993	WP_410680792.1	DNA polymerase III subunit delta'	-
ACIRXL_RS07890 (ACIRXL_07890)	-	1591795..1592577 (+)	783	WP_410680791.1	TatD family hydrolase	-
ACIRXL_RS07895 (ACIRXL_07895)	-	1592606..1593133 (+)	528	WP_410680790.1	DUF1523 family protein	-
ACIRXL_RS07900 (ACIRXL_07900)	-	1593199..1594485 (+)	1287	WP_410680789.1	hemolysin family protein	-
ACIRXL_RS07905 (ACIRXL_07905)	rpmE	1594552..1594764 (-)	213	WP_035685509.1	50S ribosomal protein L31	-
ACIRXL_RS07910 (ACIRXL_07910)	priA	1594967..1597153 (+)	2187	WP_410680788.1	primosomal protein N'	Machinery gene
ACIRXL_RS07915 (ACIRXL_07915)	-	1597344..1598006 (+)	663	WP_046097496.1	SPOR domain-containing protein	-
ACIRXL_RS07920 (ACIRXL_07920)	msrP	1598236..1599195 (+)	960	WP_410680786.1	protein-methionine-sulfoxide reductase catalytic subunit MsrP	-
ACIRXL_RS07925 (ACIRXL_07925)	-	1599195..1599770 (+)	576	WP_410680785.1	sulfite oxidase heme-binding subunit YedZ	-
ACIRXL_RS07930 (ACIRXL_07930)	rlmC	1599767..1600930 (-)	1164	WP_410683686.1	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	-
ACIRXL_RS07935 (ACIRXL_07935)	nagZ	1600940..1601983 (-)	1044	WP_410683584.1	beta-N-acetylhexosaminidase	-

Sequence

Protein

• Length: 728 a.a.
• Molecular weight: 82783.72 Da
• Isoelectric Point: 8.9277

>NTDB_id=957779 ACIRXL_RS07910 WP_410680788.1 1594967..1597153(+) (priA) [Avibacterium paragallinarum strain npAP/GA-USA/20231216/S1-1]
MNLVRVVLAVPLFQFFDYLLPEEMQPVRGGRVLVPFGRQQRVGIVVDFPAQSEVASEQLKPICQVLDEENLFNEPLWQLI
HWAANYYQAPLGEALFQALPVKLRQGESAVENDRTFLRITPQGEQALRENLLKRAKKQQEALQLLAQSSQEKGQTPFASN
IWHSLKEKGYVEEYEQANPIRPWQALEQPIVNKENKHRLNKEQALALGRILFHQGFAVWLIDGVTGSGKTEIYLQTIEET
LKKGQQVLVLVPEIGLTPQTVQRFQARFNVEINVLHSNLNDTQRLRAWQRAKSGQSAVVIGTRSALFTQFSNLGLIVIDE
EHDGSFKQQEGWRYHARDLAVVYAKLLNIPILLGSATPSLESLNNVKLGKYQHLILQKRAGNSTALQQFVIDLKHQRIQN
GLSDALANKMQEHLQQGNQVLLFLNRRGFAPVLFCHECGWIATCQHCEKPYTYHQHQRVLRCHHCSSQKSIPMQCGHCGS
THLMTTGLGTEQLEETLKQRFPDYVVTRIDRDSTARKGTLEKHLQDIQQGKSQILIGTQMLAKGHHFPNVTLVGLLNVDN
ALFSLDFRAEERLAQLYVQVAGRAGRSEKHGQVVLQTHYPDHPLLRSLLKEGYGEFAQQALHLREQMGLPPYSSQALFRA
QSRHSEQAEQFLQQIAATLQHLQIDGLQIYGPMPAPFSKKAGAYRWQLLVQHSSRAVLHQALSQFQANMPQKSHQVRWIL
DVDPLDLT

Nucleotide

• Length: 2187 bp

>NTDB_id=957779 ACIRXL_RS07910 WP_410680788.1 1594967..1597153(+) (priA) [Avibacterium paragallinarum strain npAP/GA-USA/20231216/S1-1]
ATGAATCTTGTCCGTGTCGTATTGGCAGTGCCATTGTTTCAATTTTTTGATTATTTACTCCCTGAAGAGATGCAACCCGT
GCGTGGTGGGCGGGTGCTTGTGCCTTTTGGACGACAACAACGGGTTGGCATTGTGGTGGATTTCCCCGCACAAAGTGAGG
TCGCCTCCGAACAGCTCAAACCCATTTGCCAAGTGCTAGATGAAGAAAATCTCTTTAATGAACCCCTGTGGCAGTTGATC
CATTGGGCTGCGAATTATTATCAAGCCCCACTGGGTGAGGCGTTATTTCAAGCCTTGCCAGTGAAATTGCGACAGGGAGA
AAGTGCGGTGGAAAATGACCGCACTTTTTTACGCATTACCCCGCAGGGCGAGCAGGCATTGCGGGAGAATTTGCTGAAAC
GGGCGAAAAAACAACAAGAAGCCTTGCAGTTGCTCGCTCAATCCTCGCAGGAAAAAGGGCAAACGCCGTTTGCTTCTAAC
ATTTGGCATAGCCTCAAGGAAAAGGGCTATGTGGAGGAATACGAGCAAGCCAACCCTATTCGTCCTTGGCAAGCCCTTGA
ACAGCCGATCGTCAATAAAGAAAACAAACATCGTTTAAACAAAGAACAAGCCCTCGCATTGGGCCGAATTTTGTTTCATC
AAGGCTTTGCTGTGTGGTTGATTGATGGGGTTACGGGATCGGGCAAAACGGAAATCTATTTACAAACCATTGAAGAAACC
TTGAAAAAGGGGCAGCAAGTGCTGGTGCTTGTGCCTGAAATTGGCTTAACGCCGCAAACGGTACAACGTTTTCAAGCACG
CTTCAATGTGGAAATTAATGTGCTTCACTCCAATTTGAACGATACTCAGCGGTTGCGTGCGTGGCAGCGAGCGAAATCGG
GGCAAAGTGCGGTGGTAATCGGCACAAGATCGGCGTTGTTCACTCAGTTTTCCAATTTGGGCTTGATCGTGATCGATGAA
GAACACGATGGCTCATTTAAACAGCAAGAAGGCTGGCGTTATCACGCTAGGGATCTGGCAGTGGTGTATGCCAAATTGCT
GAATATTCCGATTTTATTGGGATCGGCAACGCCAAGTTTGGAAAGCCTGAATAATGTGAAGCTGGGCAAATATCAGCACC
TTATTTTGCAAAAACGGGCAGGAAATAGCACCGCACTTCAACAATTTGTCATTGATTTGAAACATCAGCGGATTCAAAAT
GGGCTGTCTGATGCCTTGGCAAATAAAATGCAAGAGCATTTGCAACAGGGTAATCAAGTGCTGTTATTCCTTAATCGGCG
TGGCTTTGCCCCCGTTTTGTTTTGCCACGAATGCGGTTGGATCGCGACCTGCCAGCATTGTGAAAAGCCCTATACTTATC
ATCAACATCAGCGGGTGTTGCGTTGCCATCATTGCAGTTCACAAAAGTCGATCCCAATGCAATGCGGGCATTGTGGATCA
ACCCATTTGATGACCACAGGGCTTGGCACGGAACAGCTGGAAGAAACCCTAAAACAACGCTTTCCTGATTATGTGGTAAC
CCGCATTGATCGCGATAGCACCGCTCGTAAAGGCACATTGGAGAAGCATCTGCAAGATATTCAACAAGGAAAAAGCCAAA
TTCTCATCGGCACGCAAATGCTGGCGAAAGGACATCATTTCCCCAATGTCACCCTCGTTGGGCTTTTGAATGTAGATAAT
GCCTTGTTTTCGTTAGATTTTCGTGCGGAAGAACGACTTGCTCAGCTTTATGTACAAGTGGCAGGGCGTGCGGGGCGAAG
TGAAAAGCACGGACAAGTGGTGCTACAAACCCATTATCCCGATCATCCTTTGCTACGCTCATTATTGAAAGAGGGCTATG
GCGAGTTTGCTCAGCAAGCCTTGCATTTACGCGAACAAATGGGACTGCCGCCGTACAGCTCGCAGGCGTTATTTCGCGCT
CAAAGCCGTCATTCGGAGCAAGCAGAGCAGTTTTTGCAACAGATCGCCGCGACATTACAGCATTTACAGATCGATGGCTT
GCAAATTTACGGCCCAATGCCTGCCCCATTCAGCAAAAAGGCAGGGGCGTATCGCTGGCAATTATTGGTGCAACACTCAT
CAAGAGCGGTGTTACATCAGGCATTAAGTCAATTCCAAGCCAATATGCCGCAAAAATCCCACCAAGTTCGCTGGATTTTA
GATGTCGATCCCCTTGATTTAACCTAA

Domains

Predicted by InterProScan.

• DEAD/DEAH box helicase (DEAD) (203-364)

• 3DNA-binding domain (3BD) (PriA_3primeBD) (5-100)

• PriA DNA helicase Cys-rich region (CRR) domain (Zn_ribbon_PriA) (444-469)

• Primosomal protein N C-terminal domain (PriA_C) (631-724)

• Helicase conserved C-terminal domain (Helicase_C) (500-587)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
priA	Acinetobacter baumannii D1279779	44.986	100	0.456
priA	Bacillus subtilis subsp. subtilis str. 168	33.045	100	0.367