Detailed information NTG0957692

Bioinformatically predicted

Overview

• Name: priA
• Type: Machinery gene
• Locus tag: ACIRXM_RS00660
• Genome accession: NZ_CP173234
• Coordinates: 128156..130342 (-)
• Length: 728 a.a.
• NCBI ID: WP_410686799.1
• Uniprot ID: -
• Organism: Avibacterium paragallinarum strain npAP/NC-USA/20240110/S1-1
• Function: DNA puliing through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 123156..135342

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACIRXM_RS00635 (ACIRXM_00640)	nagZ	123324..124370 (+)	1047	WP_410686791.1	beta-N-acetylhexosaminidase	-
ACIRXM_RS00640 (ACIRXM_00645)	rlmC	124370..125542 (+)	1173	WP_410686793.1	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	-
ACIRXM_RS00645 (ACIRXM_00650)	-	125539..126114 (-)	576	WP_410686795.1	sulfite oxidase heme-binding subunit YedZ	-
ACIRXM_RS00650 (ACIRXM_00655)	msrP	126114..127073 (-)	960	WP_410686796.1	protein-methionine-sulfoxide reductase catalytic subunit MsrP	-
ACIRXM_RS00655 (ACIRXM_00660)	-	127303..127965 (-)	663	WP_410686797.1	SPOR domain-containing protein	-
ACIRXM_RS00660 (ACIRXM_00665)	priA	128156..130342 (-)	2187	WP_410686799.1	primosomal protein N'	Machinery gene
ACIRXM_RS00665 (ACIRXM_00670)	rpmE	130544..130756 (+)	213	WP_035685509.1	50S ribosomal protein L31	-
ACIRXM_RS00670 (ACIRXM_00675)	-	130841..132127 (-)	1287	WP_410686801.1	hemolysin family protein	-
ACIRXM_RS00675 (ACIRXM_00680)	-	132193..132720 (-)	528	WP_017805123.1	DUF1523 family protein	-
ACIRXM_RS00680 (ACIRXM_00685)	-	132749..133531 (-)	783	WP_410678029.1	TatD family hydrolase	-
ACIRXM_RS00685 (ACIRXM_00690)	-	133541..134545 (-)	1005	WP_410686803.1	DNA polymerase III subunit delta'	-
ACIRXM_RS00690 (ACIRXM_00695)	tmk	134551..135180 (-)	630	WP_410686805.1	dTMP kinase	-

Sequence

Protein

• Length: 728 a.a.
• Molecular weight: 82735.54 Da
• Isoelectric Point: 8.5341

>NTDB_id=957692 ACIRXM_RS00660 WP_410686799.1 128156..130342(-) (priA) [Avibacterium paragallinarum strain npAP/NC-USA/20240110/S1-1]
MNLVRVALAVPLFQFFDYLLPEEMQPVRGGRVLVPFGRQQRVGIVVDFPAQSEVASEQLKPICQVLDEENLFNEPLWQLI
YWAANYYQAPLGEALFQALPVKLRQGESAVENDRTFLRITPQGEQALRENLLKRAKKQQEALHSLAQSPQEKGQTPFASN
IWHSLKEKGYVEEYEQANPIRPWQALEQPIVNEENKHRLNKEQALALGRILFHQGFAVWLIDGVTGSGKTEIYLQTIEET
LKKGQQVLVLVPEIGLTPQTVQRFQARFNVEIDVLHSNLNDTQRLRAWQRAKSGQSAVVIGTRSALFTQFSNLGLIVIDE
EHDGSFKQQEGWRYHARDLAVVYAKLLNIPILLGSATPSLESLNNVKLGKYQHLILQKRAGNSTALQQFVIDLKHQRIQN
GLSDALANKMQEHLQQGNQVLLFLNRRGFAPVLFCHECGWIATCQHCEKPYTYHQHQRVLRCHHCSSQKSIPMQCGHCGS
THLMTTGLGTEQLEDTLKQRFPDYVVTRIDRDSTARKGTLEKHLQDIQQGKSQILIGTQMLAKGHHFPNVTLVGLLNVDN
ALFSLDFRAEERLAQLYVQVAGRAGRSEKHGQVVLQTHYPDHPLLRSLLKEGYGEFAQQALHLREQMGLPPYSSQALFRA
QSRHSEQAEQFLQQIAATLQHLSIEGLQIYGPMPAPFSKKAGAYRWQLLVQHSSRAVLHQALSQFQANMPQKSHQVRWIL
DVDPLDLT

Nucleotide

• Length: 2187 bp

>NTDB_id=957692 ACIRXM_RS00660 WP_410686799.1 128156..130342(-) (priA) [Avibacterium paragallinarum strain npAP/NC-USA/20240110/S1-1]
ATGAATCTTGTCCGTGTCGCGTTGGCAGTGCCGTTGTTTCAATTTTTTGATTATTTACTCCCCGAAGAGATGCAACCCGT
GCGTGGTGGGCGGGTGCTTGTGCCTTTTGGACGACAACAACGGGTTGGCATTGTGGTGGATTTCCCCGCACAAAGTGAGG
TCGCCTCCGAACAGCTCAAACCCATTTGCCAAGTGCTAGATGAAGAAAATCTCTTTAATGAACCCCTGTGGCAGTTGATC
TATTGGGCTGCGAATTATTATCAAGCCCCACTGGGTGAGGCGTTATTTCAAGCCTTGCCTGTGAAATTACGACAGGGAGA
AAGTGCGGTGGAAAATGACCGCACTTTTTTACGCATTACCCCACAGGGGGAGCAGGCATTGCGGGAGAATTTGCTAAAGC
GGGCGAAAAAACAACAAGAAGCCTTGCATTCACTCGCACAGTCCCCGCAGGAAAAAGGGCAAACGCCGTTTGCTTCTAAC
ATTTGGCATAGCCTCAAGGAAAAGGGCTATGTGGAGGAATACGAGCAAGCCAACCCTATTCGTCCTTGGCAAGCCCTTGA
ACAGCCGATCGTCAATGAAGAAAACAAACATCGTTTAAACAAAGAACAAGCCCTCGCATTGGGCCGAATTTTGTTTCATC
AAGGCTTTGCTGTGTGGTTGATTGATGGGGTTACGGGATCGGGCAAAACGGAAATCTATTTACAAACCATTGAAGAAACC
TTGAAAAAGGGGCAGCAAGTGCTGGTGCTTGTGCCTGAAATTGGCTTAACGCCGCAAACGGTACAACGTTTTCAAGCACG
CTTCAATGTGGAAATTGATGTGCTTCACTCCAATTTGAACGATACTCAGCGGTTGCGTGCGTGGCAGCGAGCGAAATCGG
GGCAAAGTGCGGTGGTGATCGGCACAAGATCGGCGTTGTTCACCCAATTTTCCAATTTGGGCTTGATCGTGATCGATGAA
GAACACGATGGCTCGTTCAAACAACAAGAAGGCTGGCGTTATCACGCTAGGGATCTGGCAGTAGTGTATGCCAAATTGCT
GAATATTCCGATTTTATTGGGATCGGCAACGCCAAGTTTGGAAAGCCTGAATAATGTGAAGCTGGGCAAATATCAGCACC
TTATTTTGCAAAAACGGGCAGGAAATAGCACCGCACTTCAACAATTTGTCATTGATTTGAAACATCAGCGGATTCAAAAT
GGGCTGTCTGATGCCTTGGCAAATAAAATGCAAGAGCATTTGCAACAGGGTAATCAAGTGCTGTTATTCCTTAATCGGCG
TGGCTTTGCCCCCGTTTTGTTTTGCCACGAATGCGGTTGGATCGCGACCTGCCAGCATTGTGAAAAGCCCTATACTTATC
ATCAACATCAGCGGGTGTTGCGTTGCCATCATTGCAGTTCACAAAAGTCGATCCCAATGCAATGCGGGCATTGTGGATCA
ACCCATTTGATGACCACTGGGCTTGGCACGGAACAGCTTGAAGACACCCTAAAACAGCGTTTTCCTGATTATGTGGTAAC
CCGAATTGATCGCGACAGCACCGCTCGCAAAGGCACATTGGAGAAGCATCTGCAAGATATTCAGCAAGGAAAGAGCCAAA
TTCTTATCGGCACGCAAATGTTGGCGAAAGGACATCATTTCCCCAATGTTACCCTCGTAGGGCTTTTGAATGTAGATAAT
GCCTTGTTTTCGTTAGATTTTCGTGCGGAAGAACGGCTCGCTCAGCTTTATGTACAAGTGGCAGGGCGTGCGGGGCGAAG
CGAAAAACACGGGCAAGTGGTACTACAAACTCATTACCCCGATCACCCTTTATTACGCTCATTATTGAAAGAGGGCTATG
GCGAGTTTGCTCAGCAAGCCTTGCATTTACGCGAACAAATGGGACTGCCGCCGTACAGCTCGCAGGCGTTATTTCGCGCT
CAAAGCCGTCATTCGGAGCAAGCAGAGCAGTTTTTGCAACAGATCGCCGCGACATTACAGCATTTATCCATTGAGGGCTT
GCAAATTTATGGTCCAATGCCTGCCCCATTCAGCAAAAAGGCAGGGGCGTATCGTTGGCAATTATTGGTGCAACACTCAT
CAAGAGCGGTGTTACATCAGGCATTAAGCCAATTCCAAGCCAATATGCCGCAAAAATCCCACCAAGTTCGCTGGATTTTA
GATGTCGATCCCCTTGATTTAACCTAA

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (517-587)

• DEAD/DEAH box helicase (DEAD) (203-364)

• 3DNA-binding domain (3BD) (PriA_3primeBD) (5-100)

• Primosomal protein N C-terminal domain (PriA_C) (631-724)

• PriA DNA helicase Cys-rich region (CRR) domain (Zn_ribbon_PriA) (444-469)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
priA	Acinetobacter baumannii D1279779	44.851	100	0.455
priA	Bacillus subtilis subsp. subtilis str. 168	32.714	100	0.363