Detailed information    

insolico Bioinformatically predicted

Overview

Name   treR   Type   Regulator
Locus tag   AABA14_RS09165 Genome accession   NZ_AP028607
Coordinates   1780007..1780717 (+) Length   236 a.a.
NCBI ID   WP_000760673.1    Uniprot ID   A0A0H2URH4
Organism   Streptococcus pneumoniae strain Sep2     
Function   regulate expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1775007..1785717
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AABA14_RS09150 (TKY123642_18220) - 1775548..1775796 (-) 249 WP_000364990.1 YneF family protein -
  AABA14_RS09155 (TKY123642_18230) treC 1776052..1777677 (-) 1626 WP_000171211.1 alpha,alpha-phosphotrehalase -
  AABA14_RS09160 (TKY123642_18240) treP 1777855..1779822 (-) 1968 WP_000514329.1 PTS system trehalose-specific EIIBC component -
  AABA14_RS09165 (TKY123642_18250) treR 1780007..1780717 (+) 711 WP_000760673.1 trehalose operon repressor Regulator
  AABA14_RS09170 (TKY123642_18260) - 1780750..1781553 (-) 804 WP_000157664.1 ATP-binding cassette domain-containing protein -
  AABA14_RS09175 (TKY123642_18270) - 1781566..1782459 (-) 894 WP_001012091.1 ABC transporter permease -
  AABA14_RS09180 - 1782471..1783408 (-) 938 Protein_1817 ABC transporter substrate-binding protein -
  AABA14_RS09185 (TKY123642_18300) - 1783899..1784825 (-) 927 WP_001291293.1 ATP-binding cassette domain-containing protein -

Sequence

Protein


Download         Length: 236 a.a.        Molecular weight: 27607.78 Da        Isoelectric Point: 8.9698

>NTDB_id=95751 AABA14_RS09165 WP_000760673.1 1780007..1780717(+) (treR) [Streptococcus pneumoniae strain Sep2]
MKKYQQLFKQIQETIQNETYAVGDFLPSEHDLMEQYQVSRDTVRKALSLLQEEGLIKKIRGQGSQVVKEETVNFPVSNLT
SYQELVKELGLRSKTNVVSLDKIIIDKKSSLITGFPEFRMVWKVVRQRVVDDLVSVLDTDYLDMELIPNLTRQIAEQSIY
SYIENGLKLLIDYAQKEITIDHSSDRDKILMDIGKDPYVVSIKSKVYLQDGRQFQFTESRHKLEKFRFVDFAKRKK

Nucleotide


Download         Length: 711 bp        

>NTDB_id=95751 AABA14_RS09165 WP_000760673.1 1780007..1780717(+) (treR) [Streptococcus pneumoniae strain Sep2]
ATGAAGAAATACCAACAATTATTTAAGCAAATCCAAGAAACCATTCAAAACGAGACTTACGCTGTCGGAGATTTCCTTCC
TAGCGAGCACGACCTTATGGAGCAATATCAAGTGAGTCGTGATACCGTCCGAAAGGCCCTGTCTCTCCTCCAAGAGGAAG
GATTGATCAAAAAGATAAGAGGGCAAGGTTCTCAAGTCGTCAAAGAAGAAACCGTCAATTTCCCTGTATCCAACCTAACC
AGCTACCAAGAACTAGTTAAAGAACTTGGACTGCGCTCTAAAACCAACGTGGTCAGTCTGGACAAGATTATTATTGATAA
AAAATCCTCACTGATAACCGGTTTCCCAGAGTTTCGGATGGTTTGGAAGGTGGTCCGCCAGCGTGTGGTGGATGATCTGG
TATCCGTTCTGGATACGGACTATCTGGATATGGAACTAATTCCAAATCTCACTCGCCAAATTGCTGAGCAGTCTATCTAT
TCTTATATAGAAAATGGCCTCAAACTCCTTATTGATTATGCTCAGAAGGAAATCACCATTGACCACTCAAGCGACCGAGA
CAAGATTCTCATGGACATTGGCAAAGACCCTTATGTCGTTTCGATTAAATCAAAAGTCTATCTCCAAGACGGACGCCAAT
TTCAGTTTACCGAAAGTCGCCATAAGTTAGAAAAATTTAGATTTGTAGATTTTGCAAAACGCAAGAAATAA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, gntR family (GntR)

(3-66)

UTRA domain (UTRA)

(89-227)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2URH4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  treR Streptococcus mutans UA159

59.322

100

0.593