Detailed information NTG0957440

Bioinformatically predicted

Overview

• Name: priA
• Type: Machinery gene
• Locus tag: ACIO04_RS04225
• Genome accession: NZ_CP173229
• Coordinates: 878667..880853 (-)
• Length: 728 a.a.
• NCBI ID: WP_410680788.1
• Uniprot ID: -
• Organism: Avibacterium paragallinarum strain npAP/GA-USA/20231220/S2-1
• Function: DNA puliing through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 873667..885853

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACIO04_RS04200 (ACIO04_04200)	nagZ	873837..874880 (+)	1044	WP_410680784.1	beta-N-acetylhexosaminidase	-
ACIO04_RS04205 (ACIO04_04205)	rlmC	874890..876053 (+)	1164	WP_410681046.1	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	-
ACIO04_RS04210 (ACIO04_04210)	-	876050..876625 (-)	576	WP_410680785.1	sulfite oxidase heme-binding subunit YedZ	-
ACIO04_RS04215 (ACIO04_04215)	msrP	876625..877584 (-)	960	WP_410680786.1	protein-methionine-sulfoxide reductase catalytic subunit MsrP	-
ACIO04_RS04220 (ACIO04_04220)	-	877814..878476 (-)	663	WP_046097496.1	SPOR domain-containing protein	-
ACIO04_RS04225 (ACIO04_04225)	priA	878667..880853 (-)	2187	WP_410680788.1	primosomal protein N'	Machinery gene
ACIO04_RS04230 (ACIO04_04230)	rpmE	881056..881268 (+)	213	WP_035685509.1	50S ribosomal protein L31	-
ACIO04_RS04235 (ACIO04_04235)	-	881335..882621 (-)	1287	WP_410680789.1	hemolysin family protein	-
ACIO04_RS04240 (ACIO04_04240)	-	882687..883214 (-)	528	WP_410680790.1	DUF1523 family protein	-
ACIO04_RS04245 (ACIO04_04245)	-	883243..884025 (-)	783	WP_410680791.1	TatD family hydrolase	-
ACIO04_RS04250 (ACIO04_04250)	-	884035..885027 (-)	993	WP_410680792.1	DNA polymerase III subunit delta'	-
ACIO04_RS04255 (ACIO04_04255)	tmk	885033..885662 (-)	630	WP_410680793.1	dTMP kinase	-

Sequence

Protein

• Length: 728 a.a.
• Molecular weight: 82783.72 Da
• Isoelectric Point: 8.9277

>NTDB_id=957440 ACIO04_RS04225 WP_410680788.1 878667..880853(-) (priA) [Avibacterium paragallinarum strain npAP/GA-USA/20231220/S2-1]
MNLVRVVLAVPLFQFFDYLLPEEMQPVRGGRVLVPFGRQQRVGIVVDFPAQSEVASEQLKPICQVLDEENLFNEPLWQLI
HWAANYYQAPLGEALFQALPVKLRQGESAVENDRTFLRITPQGEQALRENLLKRAKKQQEALQLLAQSSQEKGQTPFASN
IWHSLKEKGYVEEYEQANPIRPWQALEQPIVNKENKHRLNKEQALALGRILFHQGFAVWLIDGVTGSGKTEIYLQTIEET
LKKGQQVLVLVPEIGLTPQTVQRFQARFNVEINVLHSNLNDTQRLRAWQRAKSGQSAVVIGTRSALFTQFSNLGLIVIDE
EHDGSFKQQEGWRYHARDLAVVYAKLLNIPILLGSATPSLESLNNVKLGKYQHLILQKRAGNSTALQQFVIDLKHQRIQN
GLSDALANKMQEHLQQGNQVLLFLNRRGFAPVLFCHECGWIATCQHCEKPYTYHQHQRVLRCHHCSSQKSIPMQCGHCGS
THLMTTGLGTEQLEETLKQRFPDYVVTRIDRDSTARKGTLEKHLQDIQQGKSQILIGTQMLAKGHHFPNVTLVGLLNVDN
ALFSLDFRAEERLAQLYVQVAGRAGRSEKHGQVVLQTHYPDHPLLRSLLKEGYGEFAQQALHLREQMGLPPYSSQALFRA
QSRHSEQAEQFLQQIAATLQHLQIDGLQIYGPMPAPFSKKAGAYRWQLLVQHSSRAVLHQALSQFQANMPQKSHQVRWIL
DVDPLDLT

Nucleotide

• Length: 2187 bp

>NTDB_id=957440 ACIO04_RS04225 WP_410680788.1 878667..880853(-) (priA) [Avibacterium paragallinarum strain npAP/GA-USA/20231220/S2-1]
ATGAATCTTGTCCGTGTCGTATTGGCAGTGCCATTGTTTCAATTTTTTGATTATTTACTCCCTGAAGAGATGCAACCCGT
GCGTGGTGGGCGGGTGCTTGTGCCTTTTGGACGACAACAACGGGTTGGCATTGTGGTGGATTTCCCCGCACAAAGTGAGG
TCGCCTCCGAACAGCTCAAACCCATTTGCCAAGTGCTAGATGAAGAAAATCTCTTTAATGAACCCCTGTGGCAGTTGATC
CATTGGGCTGCGAATTATTATCAAGCCCCACTGGGTGAGGCGTTATTTCAAGCCTTGCCAGTGAAATTGCGACAGGGAGA
AAGTGCGGTGGAAAATGACCGCACTTTTTTACGCATTACCCCGCAGGGCGAGCAGGCATTGCGGGAGAATTTGCTGAAAC
GGGCGAAAAAACAACAAGAAGCCTTGCAGTTGCTCGCTCAATCCTCGCAGGAAAAAGGGCAAACGCCGTTTGCTTCTAAC
ATTTGGCATAGCCTCAAGGAAAAGGGCTATGTGGAGGAATACGAGCAAGCCAACCCTATTCGTCCTTGGCAAGCCCTTGA
ACAGCCGATCGTCAATAAAGAAAACAAACATCGTTTAAACAAAGAACAAGCCCTCGCATTGGGCCGAATTTTGTTTCATC
AAGGCTTTGCTGTGTGGTTGATTGATGGGGTTACGGGATCGGGCAAAACGGAAATCTATTTACAAACCATTGAAGAAACC
TTGAAAAAGGGGCAGCAAGTGCTGGTGCTTGTGCCTGAAATTGGCTTAACGCCGCAAACGGTACAACGTTTTCAAGCACG
CTTCAATGTGGAAATTAATGTGCTTCACTCCAATTTGAACGATACTCAGCGGTTGCGTGCGTGGCAGCGAGCGAAATCGG
GGCAAAGTGCGGTGGTAATCGGCACAAGATCGGCGTTGTTCACTCAGTTTTCCAATTTGGGCTTGATCGTGATCGATGAA
GAACACGATGGCTCATTTAAACAGCAAGAAGGCTGGCGTTATCACGCTAGGGATCTGGCAGTGGTGTATGCCAAATTGCT
GAATATTCCGATTTTATTGGGATCGGCAACGCCAAGTTTGGAAAGCCTGAATAATGTGAAGCTGGGCAAATATCAGCACC
TTATTTTGCAAAAACGGGCAGGAAATAGCACCGCACTTCAACAATTTGTCATTGATTTGAAACATCAGCGGATTCAAAAT
GGGCTGTCTGATGCCTTGGCAAATAAAATGCAAGAGCATTTGCAACAGGGTAATCAAGTGCTGTTATTCCTTAATCGGCG
TGGCTTTGCCCCCGTTTTGTTTTGCCACGAATGCGGTTGGATCGCGACCTGCCAGCATTGTGAAAAGCCCTATACTTATC
ATCAACATCAGCGGGTGTTGCGTTGCCATCATTGCAGTTCACAAAAGTCGATCCCAATGCAATGCGGGCATTGTGGATCA
ACCCATTTGATGACCACAGGGCTTGGCACGGAACAGCTGGAAGAAACCCTAAAACAACGCTTTCCTGATTATGTGGTAAC
CCGCATTGATCGCGATAGCACCGCTCGTAAAGGCACATTGGAGAAGCATCTGCAAGATATTCAACAAGGAAAAAGCCAAA
TTCTCATCGGCACGCAAATGCTGGCGAAAGGACATCATTTCCCCAATGTCACCCTCGTTGGGCTTTTGAATGTAGATAAT
GCCTTGTTTTCGTTAGATTTTCGTGCGGAAGAACGACTTGCTCAGCTTTATGTACAAGTGGCAGGGCGTGCGGGGCGAAG
TGAAAAGCACGGACAAGTGGTGCTACAAACCCATTATCCCGATCATCCTTTGCTACGCTCATTATTGAAAGAGGGCTATG
GCGAGTTTGCTCAGCAAGCCTTGCATTTACGCGAACAAATGGGACTGCCGCCGTACAGCTCGCAGGCGTTATTTCGCGCT
CAAAGCCGTCATTCGGAGCAAGCAGAGCAGTTTTTGCAACAGATCGCCGCGACATTACAGCATTTACAGATCGATGGCTT
GCAAATTTACGGCCCAATGCCTGCCCCATTCAGCAAAAAGGCAGGGGCGTATCGCTGGCAATTATTGGTGCAACACTCAT
CAAGAGCGGTGTTACATCAGGCATTAAGTCAATTCCAAGCCAATATGCCGCAAAAATCCCACCAAGTTCGCTGGATTTTA
GATGTCGATCCCCTTGATTTAACCTAA

Domains

Predicted by InterProScan.

• DEAD/DEAH box helicase (DEAD) (203-364)

• 3DNA-binding domain (3BD) (PriA_3primeBD) (5-100)

• PriA DNA helicase Cys-rich region (CRR) domain (Zn_ribbon_PriA) (444-469)

• Primosomal protein N C-terminal domain (PriA_C) (631-724)

• Helicase conserved C-terminal domain (Helicase_C) (500-587)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
priA	Acinetobacter baumannii D1279779	44.986	100	0.456
priA	Bacillus subtilis subsp. subtilis str. 168	33.045	100	0.367