Detailed information NTG0957402

Bioinformatically predicted

Overview

• Name: priA
• Type: Machinery gene
• Locus tag: ACIO07_RS05640
• Genome accession: NZ_CP173228
• Coordinates: 1092835..1095021 (+)
• Length: 728 a.a.
• NCBI ID: WP_410683347.1
• Uniprot ID: -
• Organism: Avibacterium paragallinarum strain npAP/GA-USA/20231220/S2-3
• Function: DNA puliing through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1087835..1100021

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACIO07_RS05610 (ACIO07_05615)	tmk	1088008..1088637 (+)	630	WP_410683343.1	dTMP kinase	-
ACIO07_RS05615 (ACIO07_05620)	-	1088643..1089635 (+)	993	WP_410683344.1	DNA polymerase III subunit delta'	-
ACIO07_RS05620 (ACIO07_05625)	-	1089645..1090427 (+)	783	WP_103855584.1	TatD family hydrolase	-
ACIO07_RS05625 (ACIO07_05630)	-	1090456..1090983 (+)	528	WP_410683345.1	DUF1523 family protein	-
ACIO07_RS05630 (ACIO07_05635)	-	1091050..1092336 (+)	1287	WP_410683346.1	hemolysin family protein	-
ACIO07_RS05635 (ACIO07_05640)	rpmE	1092421..1092633 (-)	213	WP_035685509.1	50S ribosomal protein L31	-
ACIO07_RS05640 (ACIO07_05645)	priA	1092835..1095021 (+)	2187	WP_410683347.1	primosomal protein N'	Machinery gene
ACIO07_RS05645 (ACIO07_05650)	-	1095213..1095875 (+)	663	WP_410683348.1	SPOR domain-containing protein	-
ACIO07_RS05650 (ACIO07_05655)	msrP	1096105..1097064 (+)	960	WP_410683349.1	protein-methionine-sulfoxide reductase catalytic subunit MsrP	-
ACIO07_RS05655 (ACIO07_05660)	-	1097064..1097639 (+)	576	WP_410683350.1	sulfite oxidase heme-binding subunit YedZ	-
ACIO07_RS05660 (ACIO07_05665)	rlmC	1097636..1098808 (-)	1173	WP_410683351.1	23S rRNA (uracil(747)-C(5))-methyltransferase RlmC	-
ACIO07_RS05665 (ACIO07_05670)	nagZ	1098808..1099854 (-)	1047	WP_410683352.1	beta-N-acetylhexosaminidase	-

Sequence

Protein

• Length: 728 a.a.
• Molecular weight: 82850.75 Da
• Isoelectric Point: 8.6657

>NTDB_id=957402 ACIO07_RS05640 WP_410683347.1 1092835..1095021(+) (priA) [Avibacterium paragallinarum strain npAP/GA-USA/20231220/S2-3]
MNLVRVALAVPLFQFFDYLLPEEMQPVRGGRVLVPFGRQQRVGIVVDFPAQSEVASEQLKPICQVLDEENLFNESLWQLI
HWAANYYQAPLGEALFQALPVKLRQGESAVENDRTFLRITPQGEKALRENLLKRAKKQQEALQLLAQSSQEKGQTPFASN
IWHSLKEKGYVEEYEQVNPIRPWQALEQPIVNEENKHRLNKEQALALGRILFHQGFAVWLIDGVTGSGKTEIYLQSIEET
LKKGRQVLVLVPEIGLTPQTVQRFKARFNVEIDVLHSNLNDTQRLQAWQRAKSGQSAVVIGTRSALFTQFSNLGLIVIDE
EHDSSFKQQEGWRYLARDLAVVYAKQLDIPILLGSATPSLESLNNVKLGKYQHIILQKRAGNSTALQQFVIDLKHQRMQN
GLSDALANKMQEHLQQGNQVLLFLNRRGFAPVLFCHECGWIAECQHCEKPYTYHQHQRVLRCHHCNSQKPIPMQCGHCGS
TNLMTTGLGTEQLEETLKQRFPDYVVSRIDRDSTARKGKLEQHLQDIQQGKSQILIGTQMLAKGHHFPNVTLVGLMNVDN
ALFSLDFRAEERLAQLYVQVSGRAGRGEKHGQVVLQTHYPDHPLLRTLLKDGYGEFAQQALQLRQQMGLPPYSSQALFRA
QSRHSEQAEQFLQQIAATLQHLQIDGLQIYGPMPAPFSKKAGAYRWQLLVQHSSRAVLHQALSQFQANMPQKSHQVRWIL
DVDPLDLT

Nucleotide

• Length: 2187 bp

>NTDB_id=957402 ACIO07_RS05640 WP_410683347.1 1092835..1095021(+) (priA) [Avibacterium paragallinarum strain npAP/GA-USA/20231220/S2-3]
ATGAATCTTGTCCGTGTCGCATTGGCAGTGCCGTTGTTTCAATTTTTTGATTATTTACTCCCCGAAGAGATGCAACCCGT
GCGTGGTGGGCGGGTGCTTGTGCCTTTTGGACGACAACAACGGGTTGGCATTGTGGTGGATTTCCCCGCACAAAGTGAGG
TCGCCTCCGAACAGCTCAAACCCATTTGCCAAGTGCTAGATGAAGAAAATCTCTTTAATGAATCCCTGTGGCAGTTGATC
CATTGGGCTGCGAATTATTATCAAGCCCCACTGGGTGAGGCGTTATTTCAAGCCTTGCCAGTGAAATTACGACAGGGAGA
AAGTGCGGTGGAAAATGACCGCACTTTTTTACGCATTACCCCGCAGGGGGAGAAGGCATTGCGGGAGAATTTGCTGAAAC
GGGCGAAAAAACAACAAGAAGCCTTGCAGTTGCTCGCTCAATCCTCGCAGGAAAAAGGGCAAACGCCGTTTGCTTCTAAC
ATTTGGCATAGCCTCAAGGAAAAGGGCTATGTGGAGGAATACGAGCAAGTCAACCCTATTCGTCCTTGGCAAGCCCTTGA
ACAGCCGATCGTCAATGAAGAAAACAAACACCGCCTAAACAAAGAGCAAGCCCTCGCACTGGGTCGAATTTTGTTTCATC
AAGGTTTTGCCGTGTGGTTGATTGACGGCGTAACGGGGTCGGGCAAAACGGAAATCTATTTACAAAGCATTGAAGAAACC
TTGAAAAAAGGGCGACAAGTGCTGGTGCTTGTGCCTGAAATTGGCTTAACTCCGCAAACTGTGCAACGCTTTAAGGCGCG
TTTTAATGTGGAAATTGATGTGCTGCATTCTAATTTGAACGATACACAACGCTTGCAGGCTTGGCAACGGGCAAAATCGG
GGCAAAGTGCGGTGGTAATCGGCACAAGATCGGCGTTGTTCACTCAATTTTCCAATTTGGGCTTGATCGTGATCGATGAA
GAACACGACAGTTCTTTCAAACAGCAAGAGGGCTGGCGTTATCTCGCACGGGATCTCGCCGTGGTGTATGCTAAACAGTT
AGATATTCCTATTTTATTAGGATCGGCAACGCCAAGCCTTGAGAGCTTAAATAACGTGAAGTTGGGCAAATACCAGCACA
TTATTTTGCAAAAAAGAGCAGGAAATAGTACCGCACTTCAGCAATTTGTTATCGATCTGAAACATCAGCGTATGCAAAAT
GGCTTGTCAGATGCCCTTGCCAACAAAATGCAGGAACATTTACAGCAAGGCAATCAAGTGTTGTTATTTTTAAACCGCCG
TGGTTTTGCGCCCGTGTTGTTTTGCCACGAATGCGGTTGGATTGCCGAATGTCAGCATTGCGAAAAACCTTATACTTATC
ATCAACATCAACGCGTGTTGCGCTGCCATCATTGTAACTCACAAAAGCCCATTCCAATGCAATGTGGACATTGTGGTTCA
ACAAATTTGATGACCACAGGCCTCGGCACAGAACAGTTGGAAGAAACCTTAAAACAACGTTTTCCTGATTATGTAGTAAG
TCGTATCGATCGCGATAGTACCGCGCGCAAAGGCAAGCTAGAACAGCATTTGCAAGATATTCAGCAAGGCAAAAGCCAGA
TCTTAATTGGCACGCAAATGCTCGCAAAAGGCCATCATTTTCCTAATGTTACCTTAGTGGGCTTAATGAATGTGGATAAC
GCTTTGTTTTCTTTGGATTTTCGTGCAGAGGAACGGCTTGCTCAGCTTTATGTGCAAGTGTCAGGGCGCGCGGGGCGTGG
TGAAAAACACGGACAAGTGGTGCTGCAAACGCACTATCCCGATCACCCCTTATTACGCACTTTGTTAAAAGATGGCTATG
GCGAATTTGCTCAGCAAGCCTTGCAGTTACGCCAACAAATGGGGCTGCCGCCGTACAGCTCGCAGGCGTTATTTCGCGCT
CAAAGCCGTCATTCGGAGCAAGCAGAGCAGTTTTTGCAACAGATCGCCGCGACATTACAGCATTTACAGATCGATGGCTT
GCAAATTTACGGCCCAATGCCTGCCCCATTCAGCAAAAAGGCAGGGGCGTATCGCTGGCAATTATTGGTGCAACACTCAT
CAAGAGCGGTGTTACATCAGGCATTAAGCCAATTCCAAGCCAATATGCCGCAAAAATCCCACCAAGTTCGCTGGATTTTA
GATGTCGATCCCCTTGATTTAACCTAA

Domains

Predicted by InterProScan.

• 3DNA-binding domain (3BD) (PriA_3primeBD) (5-100)

• Helicase conserved C-terminal domain (Helicase_C) (501-587)

• Primosomal protein N C-terminal domain (PriA_C) (631-724)

• DEAD/DEAH box helicase (DEAD) (203-364)

• PriA DNA helicase Cys-rich region (CRR) domain (Zn_ribbon_PriA) (444-470)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
priA	Acinetobacter baumannii D1279779	45.074	100	0.459
priA	Bacillus subtilis subsp. subtilis str. 168	33.251	100	0.37