NTDB

Overview

Name	ceuB	Type	Machinery gene
Locus tag	ACIVIR_RS10600	Genome accession	NZ_CP173225
Coordinates	2061477..2062436 (+)	Length	319 a.a.
NCBI ID	WP_000777248.1	Uniprot ID	A0A0H2ZMI3
Organism	Streptococcus pneumoniae strain 262
Function	DNA uptake (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2056477..2067436

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ACIVIR_RS10570	-	2056679..2057443 (-)	765	WP_050245233.1	nuclear transport factor 2 family protein	-
ACIVIR_RS10575	-	2057447..2057890 (-)	444	WP_000655202.1	MarR family winged helix-turn-helix transcriptional regulator	-
ACIVIR_RS10580	-	2058572..2058868 (-)	297	WP_000840137.1	bacteriocin immunity protein	-
ACIVIR_RS10585	pepA	2058890..2059954 (-)	1065	WP_000209199.1	glutamyl aminopeptidase	-
ACIVIR_RS10590	galE	2060354..2061055 (+)	702	WP_000167838.1	UDP-glucose 4-epimerase GalE	-
ACIVIR_RS10595	-	2061071..2061181 (+)	111	WP_001108391.1	hypothetical protein	-
ACIVIR_RS10600	ceuB	2061477..2062436 (+)	960	WP_000777248.1	ABC transporter permease	Machinery gene
ACIVIR_RS10605	-	2062426..2063382 (+)	957	WP_001193669.1	iron chelate uptake ABC transporter family permease subunit	-
ACIVIR_RS10610	-	2063379..2064131 (+)	753	WP_126475126.1	ABC transporter ATP-binding protein	-
ACIVIR_RS10615	-	2064227..2065192 (+)	966	WP_050221118.1	siderophore ABC transporter substrate-binding protein	-
ACIVIR_RS10620	yidD	2065417..2065659 (-)	243	WP_000821640.1	membrane protein insertion efficiency factor YidD	-
ACIVIR_RS10625	-	2065659..2066381 (-)	723	WP_001222228.1	pseudouridine synthase	-
ACIVIR_RS10630	scpB	2066368..2066937 (-)	570	WP_000105310.1	SMC-Scp complex subunit ScpB	-

Sequence

Protein

Download Length: 319 a.a. Molecular weight: 35418.29 Da Isoelectric Point: 9.7465

                                >NTDB_id=957290 ACIVIR_RS10600 WP_000777248.1 2061477..2062436(+) (ceuB) [Streptococcus pneumoniae strain 262]

MKLSHYLIGLLLLLVFLSISIGTSDFSWGKLFDFDQQTWLLFQESRLPRTISILLTASSMSMAGLLMQTITQNQFAAPST

VGTTEAAKLGMVLSLFVFPSASLTQKMLFAFVSSIVFTLFFLAFMTIFTVKERWMLPLIGIIYSGIIGSVTEVIAYRFNL

VQSMTAWTQGSFSMIQTHQYEWLFLGLIILITVWKLSQTFTIMNLGKETSESLGISYSLLEKLALFLVALTTSVTMITVG

GLPFLGVIVPNLVRKRYGDNLSQTKLMVALVGANLVLACDILSRVLIRPYELSVSLLLGIIGSLVFILLLWRGGRKDAD

Nucleotide

Download Length: 960 bp

                                >NTDB_id=957290 ACIVIR_RS10600 WP_000777248.1 2061477..2062436(+) (ceuB) [Streptococcus pneumoniae strain 262]

ATGAAACTTTCTCATTATTTAATTGGCTTACTTCTACTCCTAGTCTTTCTCTCTATTAGCATTGGGACCAGTGATTTTTC

ATGGGGAAAGCTATTTGATTTCGACCAGCAGACCTGGCTCCTCTTTCAAGAGTCCCGTCTCCCAAGAACTATCAGTATTC

TCCTGACTGCCTCTAGTATGAGTATGGCAGGCCTTCTCATGCAGACTATTACCCAAAATCAGTTTGCTGCACCGAGTACA

GTTGGAACGACTGAAGCCGCCAAACTGGGAATGGTGCTGAGCCTCTTTGTCTTTCCATCGGCTAGTCTGACCCAAAAGAT

GCTCTTCGCTTTTGTTTCATCCATCGTATTCACCCTCTTCTTCCTAGCCTTTATGACCATTTTTACTGTAAAGGAAAGGT

GGATGTTGCCTCTGATTGGGATCATCTATAGCGGGATTATCGGCTCAGTCACAGAAGTTATCGCCTATCGTTTCAATCTG

GTTCAGAGTATGACTGCCTGGACCCAGGGCTCCTTCTCCATGATTCAGACCCATCAGTATGAGTGGCTCTTCTTAGGCCT

CATCATCCTGATAACCGTTTGGAAATTATCCCAAACCTTCACCATCATGAATCTGGGGAAAGAAACCAGCGAGAGTTTGG

GGATTTCCTACTCCCTACTTGAAAAACTGGCCCTCTTTCTGGTGGCGCTAACGACAAGCGTCACCATGATTACCGTGGGT

GGCTTACCATTTCTCGGAGTTATCGTTCCCAATCTTGTTCGCAAGCGCTATGGAGATAATCTAAGTCAAACCAAACTCAT

GGTCGCACTGGTTGGTGCCAATCTAGTTCTGGCTTGCGATATCCTATCCCGAGTTCTGATTAGGCCCTATGAGTTGTCTG

TCAGTCTCTTGCTAGGAATCATCGGTAGTCTCGTCTTTATCCTACTTCTCTGGAGAGGGGGACGAAAAGATGCAGACTAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(10-312)

Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.

3D structure

Source	ID	Structure
AlphaFold DB	A0A0H2ZMI3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.

Visualization of predicted probability:

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	H_a-value
ceuB	Campylobacter jejuni subsp. jejuni 81-176	37.419	97.179	0.364

Detailed information NTG0957290